getGeneExpressionFromGEO: Function that reads in the GEO code of a dataset, and returns...

In geneExpressionFromGEO: Easily Downloads a Gene Expression Dataset from a GEO Code and Retrieves the Gene Symbols of Its Probesets

Function that reads in the GEO code of a dataset, and returns the gene expression dataframe.

Description

Function that reads in the GEO code of a dataset, and returns the gene expression dataframe.

Usage

getGeneExpressionFromGEO(datasetGeoCode, retrieveGeneSymbols, verbose = FALSE)

Arguments

datasetGeoCode	the GEO code of a dataset.
retrieveGeneSymbols	a boolean flag stating if the function should retrieve the gene symbols or not.
verbose	a boolean flag stating if helping messages should be printed or not

Value

a gene expression dataset.

Examples

geneExpressionDF1 <- getGeneExpressionFromGEO("GSE47018", FALSE, FALSE)

geneExpressionFromGEO documentation built on April 11, 2025, 6:16 p.m.