geoRglm: A Package for Generalised Linear Spatial Models
Version 0.9-8

Functions for inference in generalised linear spatial models. The posterior and predictive inference is based on Markov chain Monte Carlo methods. Package geoRglm is an extension to the package geoR, which must be installed first.

Browse man pages Browse package API and functions Browse package files

AuthorOle F. Christensen [aut, cre], Paulo J. Ribeiro Jr [aut]
Date of publication2015-04-27 09:05:25
MaintainerOle F. Christensen <OleF.Christensen@mbg.au.dk>
LicenseGPL (>= 2)
Version0.9-8
URL http://gbi.agrsci.dk/~ofch/geoRglm
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("geoRglm")

Man pages

asympvar: Asymptotic Variance
b50: Simulated Data sets which Illustrate the Usage of the Package...
binom.krige: Conditional Simulation and Prediction for the Binomial-logit...
binom.krige.bayes: Bayesian Posterior Simulation and Prediction for the Binomial...
covariog: Empirical Covariogram for a Model with log-link and an...
covariog.model.env: Envelope for Empirical Covariogram for the Poisson-log normal...
create.mcmc.coda: Create an mcmc object for the CODA package
geoRglm-defunct: Defunct Functions in the Package geoRglm
geoRglm-internal: geoRglm internal functions
glsm.krige: Prediction for a Generalised Linear Spatial Model
glsm.mcmc: Conditional Simulation for a generalised linear spatial model
hist.glm.krige.bayes: Plots Sample from Posterior Distributions
image.glm.krige.bayes: Plots Results of the Predictive Distribution
krige.glm.control: Defines options and model for prediction
likfit.glsm: Monte Carlo Maximum Likelihood Estimation in a Generalised...
lines.covariomodel: Line with a Covariogram Model
mcmc.control: Defines options for the MCMC-algorithm
model.glm.control: Defines model options
output.glm.control: Defines output options
plot.covariogram: Plot Empirical Covariogram
pois.krige: Conditional Simulation and Prediction for the Poisson Spatial...
pois.krige.bayes: Bayesian Posterior Simulation and Prediction for the Poisson...
prepare.likfit.glsm: Prepare for Monte Carlo MLE
prior.glm.control: Defines prior options
proflik.glsm: Computes Profile Likelihood for generalised linear spatial...
rongelap: Radionuclide Concentrations on Rongelap Island
summary.likGLSM: Summarizes Parameter Estimation Results for Generalised...

Functions

.BC.inv Man page
.NewtonRhapson.step Man page
.func.val Man page
.glm.krige.aux Man page
.krige.bayes.extnd Man page
.krige.conv.extnd Man page
.krige.glm.check.aux Man page
.lik.sim Man page
.lik.sim.boxcox Man page
.maxim.aux1 Man page
.mcmc.aux Man page
.mcmc.bayes.binom.logit Man page
.mcmc.bayes.conj.binom.logit Man page
.mcmc.bayes.conj.pois.boxcox Man page
.mcmc.bayes.conj.pois.log Man page
.mcmc.bayes.pois.boxcox Man page
.mcmc.bayes.pois.log Man page
.mcmc.binom.aux Man page
.mcmc.binom.logit Man page
.mcmc.boxcox.aux Man page
.mcmc.check.aux Man page
.mcmc.pois.boxcox Man page
.mcmc.pois.log Man page
.model.glm.check.aux Man page
.model.glsm.mcmc.check.aux Man page
.multgauss Man page
.object.match.names Man page
.output.glm.check.aux Man page
.pmixed Man page
.pois.log.grf Man page
.pred.aux Man page
.pred.quan.aux Man page
.prior.glm.check.aux Man page
asympvar Man page
b50 Man page
b64 Man page
binom.krige Man page
binom.krige.bayes Man page
covariog Man page
covariog.model.env Man page
create.mcmc.coda Man page
geoRglmdefunct Man page
glsm.krige Man page
glsm.mcmc Man page
hist.glm.krige.bayes Man page
image.glm.krige.bayes Man page
krige.glm.control Man page
likfit.glsm Man page
lines.covariomodel Man page
mcmc.control Man page
model.glm.control Man page
output.glm.control Man page
p50 Man page
persp.glm.krige.bayes Man page
plot.covariogram Man page
pois.krige Man page
pois.krige.bayes Man page
pois.log.krige Man page
prepare.likfit.glsm Man page
print.likGLSM Man page
print.summary.likGLSM Man page
prior.glm.control Man page
proflik.glsm Man page
rongelap Man page
summary.likGLSM Man page
y50 Man page

Files

inst
inst/CITATION
inst/doc
inst/doc/geoRglmintro.Rnw
inst/doc/geoRglmintro.R
inst/doc/geoRglmintro.pdf
src
src/geoR.h
src/geoRgeoRglm.c
src/geoRglm.c
NAMESPACE
data
data/b50.rda
data/p50.rda
data/rongelap.rda
data/b64.rda
R
R/nonpar.R
R/pois.pred.R
R/extensions.R
R/likeli.R
R/glsm.krige.R
R/proflik.R
R/binom.bayes.R
R/geoRglmstuff.R
R/general.R
R/binom.pred.R
R/pois.bayes.R
R/bayes.R
R/mcmc.R
R/zzz.R
vignettes
vignettes/geoRglmintro.Rnw
MD5
build
build/vignette.rds
DESCRIPTION
man
man/prepare.likfit.glsm.Rd
man/pois.krige.bayes.Rd
man/covariog.Rd
man/covariog.model.env.Rd
man/image.glm.krige.bayes.Rd
man/glsm.krige.Rd
man/mcmc.control.Rd
man/prior.glm.control.Rd
man/plot.covariogram.Rd
man/glsm.mcmc.Rd
man/krige.glm.control.Rd
man/likfit.glsm.Rd
man/asympvar.Rd
man/model.glm.control.Rd
man/hist.glm.krige.bayes.Rd
man/proflik.glsm.Rd
man/b50.Rd
man/binom.krige.bayes.Rd
man/create.mcmc.coda.Rd
man/summary.likGLSM.Rd
man/binom.krige.Rd
man/geoRglm-internal.Rd
man/geoRglm-defunct.Rd
man/rongelap.Rd
man/output.glm.control.Rd
man/lines.covariomodel.Rd
man/pois.krige.Rd
geoRglm documentation built on May 29, 2017, 12:52 p.m.