Man pages for gestate
Generalised Survival Trial Assessment Tool Environment
| analyse_sim | Analyse simulations of time-to-event data using arbitrary... |
| Blank | Blank Curve constructor function |
| createRFfunction | Method for creating a random draw function from a Curve... |
| createRFfunction-Curve-method | Method for creating a random draw function from a Curve... |
| create_tte_prior | Create an arbitrary prior data set from a specified Curve... |
| Curve-class | Curve Class for defining distributions |
| evaluateCDFfunction | Method for evaluating the CDF function for a Curve object at... |
| evaluateCDFfunction-Curve-method | Method for evaluating the CDF function for a Curve object at... |
| evaluateInvfunction | Method for evaluating the inverse-CDF function for a Curve... |
| evaluateInvfunction-Curve-method | Method for evaluating the inverse-CDF function for a Curve... |
| evaluatePDFfunction | Method for evaluating the PDF function for a Curve object at... |
| evaluatePDFfunction-Curve-method | Method for evaluating the PDF function for a Curve object at... |
| event_prediction | Event prediction using patient-level survival data and a... |
| event_prediction_KM | Event prediction using a lifetable and a recruitment RCurve |
| event_prediction_prior | Event prediction using patient-level survival data, prior... |
| events2power | Calculate Schoenfeld or Event Proportion power from number of... |
| Exponential | Exponential Curve constructor function |
| fit_KM | Fit Weibull, Log-Normal or Exponential survival curves to... |
| fit_tte_data | Fit Weibull, Log-Normal or Exponential survival curves to... |
| fit_tte_data_prior | Fit Weibull survival curves to patient-level time-to-event... |
| freedmanpower | Calculate Freedman power from number of events |
| frontierpower | Calculate Frontier power from number of events |
| getAssessCDFfunction | Method for returning the CDF function for a RCurve object |
| getAssessCDFfunction-RCurve-method | Method for returning the CDF function for a RCurve object |
| getCDFfunction | Method for returning the CDF function for a Curve object |
| getCDFfunction-Curve-method | Method for returning the CDF function for a Curve object |
| getInvfunction | Method for returning the inverse-CDF function for a Curve... |
| getInvfunction-Curve-method | Method for returning the inverse-CDF function for a Curve... |
| getLength | Method for returning the recruitment length from a RCurve |
| getLength-RCurve-method | Method for returning the recruitment length from a RCurve |
| getMaxF | Method for returning maximum duration of patient follow-up... |
| getMaxF-RCurve-method | Method for returning maximum duration of patient follow-up... |
| getN | Method for returning the total patient number from a RCurve |
| getNactive | Method for returning the active arm patient number from a... |
| getNactive-RCurve-method | Method for returning the active arm patient number from a... |
| getNames | Method for returning all parameter names from a Curve object |
| getNames-Curve-method | Method for returning all parameter names from a Curve object |
| getNcontrol | Method for returning the control arm patient number from a... |
| getNcontrol-RCurve-method | Method for returning the control arm patient number from a... |
| getN-RCurve-method | Method for returning the total patient number from a RCurve |
| getParam | Method for returning a single parameter from a Curve object |
| getParam-Curve-method | Method for returning a single parameter from a Curve object |
| getParams | Method for returning all parameters from a Curve object as a... |
| getParams-Curve-method | Method for returning all parameters from a Curve object as a... |
| getParamsV | Method for returning all parameters from a Curve object as a... |
| getParamsV-Curve-method | Method for returning all parameters from a Curve object as a... |
| getPatients | Method for calculating expected number of recruited patients... |
| getPatients-RCurve-method | Method for calculating expected number of recruited patients... |
| getPDFfunction | Method for returning the PDF function for a Curve object |
| getPDFfunction-Curve-method | Method for returning the PDF function for a Curve object |
| getRatio | Method for returning the recruitment ratio from a RCurve |
| getRatio-RCurve-method | Method for returning the recruitment ratio from a RCurve |
| getRFfunction | Method for returning the RF function for a Curve object |
| getRFfunction-Curve-method | Method for returning the RF function for a Curve object |
| getType | Method for returning the Curve type |
| getType-Curve-method | Method for returning the Curve type |
| GGamma | Generalised Gamma Curve constructor function |
| Gompertz | Gompertz Curve constructor function |
| InstantR | InstantR RCurve constructor function |
| LinearR | LinearR RCurve constructor function |
| LogLogistic | Log-logistic Curve constructor function |
| Lognormal | Log-normal Curve constructor function |
| MixExp | Mixture Exponential Curve constructor function |
| MixWei | Mixture Weibull Curve constructor function |
| nph_traj | Calculate analytic time-to-event trial properties under... |
| PieceExponential | Piecewise Exponential Curve constructor function |
| PieceR | PieceR RCurve constructor function |
| PieceRMaxF | PieceR RCurve constructor function |
| plotCDF | Method for plotting the CDF of a Curve object |
| plotCDF-Curve-method | Method for plotting the CDF of a Curve object |
| plot_ep | Plot event prediction output |
| plot_km_fit | Kaplan Meier Plot of Curve-Fit |
| plot_npht | Plot output from nph_traj |
| plotRecruitment | Method for plotting the Recruitment Function of a RCurve... |
| plotRecruitment-RCurve-method | Method for plotting the Recruitment Function of a RCurve... |
| plotSF | Method for plotting the Survival Function of a Curve object |
| plotSF-Curve-method | Method for plotting the Survival Function of a Curve object |
| power2events | Calculate Schoenfeld or Event Proportion based event numbers... |
| random_draw | Method for taking random draws from a Curve object... |
| random_draw-Curve-method | Method for taking random draws from a Curve object... |
| RCurve-class | RCurve Class for defining recruitment distributions |
| run_gestate | Load Shiny for Gestate Loads the Shiny interactive GUI for... |
| set_assess_time | Adjusts assessment time for simulations |
| set_event_number | Adjusts simulations so that administrative censoring occurs... |
| setPatients | Method for setting N's in an RCurve |
| setPatients-RCurve-method | Method for setting N's in an RCurve |
| show-Curve-method | Method for displaying Curve objects neatly - replaces... |
| show-RCurve-method | Method for displaying RCurve objects neatly - replaces... |
| simulate_trials | Perform simulations of time-to-event data using arbitrary... |
| simulate_trials_strata | Perform multi-strata simulations of time-to-event data using... |
| summarise_analysis | Summarise analyses of simulations of time-to-event data using... |
| survfit_fast | Create lifetable quickly |
| Weibull | Weibull Curve constructor function |
| ZV2power | Calculate Normal distribution test power based on Effect size... |
