process_gene_param: Process gene-related parameters

In ggchord: Multi-Sequence 'BLAST' Alignment Chord Diagram Visualization Tool

Process gene-related parameters

Description

Standardizes gene parameters (e.g., offset, width) from various input formats (single value/vector/list) into a list seperated by sequence and strand

Usage

process_gene_param(param, seqs, param_name, default_value, is_logical = FALSE)

Arguments

param	Input parameter (can be NULL, single value, vector, list)
seqs	Character vector, list of sequence IDs
param_name	Character, name of the parameter (used in error messages)
default_value	Default value when param is NULL
is_logical	Logical, whether the parameter is logical (TRUE/FALSE), default FALSE

Value

List (named by seq_id), where each element is a vector with "+"/"-" (parameter values for positive/negative strands)

ggchord documentation built on Aug. 8, 2025, 6:15 p.m.