process_manual_colors: Process gene color parameters in manual mode

In ggchord: Multi-Sequence 'BLAST' Alignment Chord Diagram Visualization Tool

Process gene color parameters in manual mode

Description

Standardizes gene color parameters in manual mode (color by gene annotation) into a vector named by gene annotation

Usage

process_manual_colors(gene_colors, unique_anno, gene_order)

Arguments

gene_colors	Color vector (can be NULL, single value, vector, named vector with gene annotations)
unique_anno	Character vector, unique gene annotation names
gene_order	Character vector, display order of genes in the legend, default NULL (order of appearance)

Value

Named vector (names are gene annotations), standardized color values (default uses RColorBrewer Set1)

ggchord documentation built on Aug. 8, 2025, 6:15 p.m.