ggdendro: Create Dendrograms and Tree Diagrams Using 'ggplot2'

This is a set of tools for dendrograms and tree plots using 'ggplot2'. The 'ggplot2' philosophy is to clearly separate data from the presentation. Unfortunately the plot method for dendrograms plots directly to a plot device without exposing the data. The 'ggdendro' package resolves this by making available functions that extract the dendrogram plot data. The package provides implementations for tree, rpart, as well as diana and agnes cluster diagrams.

AuthorAndrie de Vries [aut, cre], Brian D. Ripley [aut] (author of package tree)
Date of publication2016-04-27 18:28:33
MaintainerAndrie de Vries <apdevries@gmail.com>
LicenseGPL-2 | GPL-3
Version0.1-20
https://github.com/andrie/ggdendro

View on CRAN

Functions

as.dendro Man page
dendro_data Man page
dendro_data.default Man page
dendro_data.dendrogram Man page
dendro_data.hclust Man page
dendro_data.rpart Man page
dendro_data.tree Man page
dendro_data.twins Man page
dendrogram_data Man page
get_data_tree_leaf_labels Man page
ggdendro Man page
ggdendrogram Man page
ggdendro-package Man page
is.dendro Man page
label Man page
labels.rpart Man page
leaf_label Man page
rpartco Man page
rpart_labels Man page
rpart_segments Man page
segment Man page
theme_dendro Man page
treeco Man page
tree_labels Man page
tree_segments Man page

Files

ggdendro
ggdendro/inst
ggdendro/inst/examples
ggdendro/inst/examples/example_ggdendrogram.R
ggdendro/inst/examples/example_dendro_tree.R
ggdendro/inst/examples/example_dendro_data.R
ggdendro/inst/examples/example_dendro_twins.R
ggdendro/inst/examples/example_dendro_rpart.R
ggdendro/inst/doc
ggdendro/inst/doc/ggdendro.R
ggdendro/inst/doc/ggdendro.Rmd
ggdendro/inst/doc/ggdendro.html
ggdendro/tests
ggdendro/tests/testthat.R
ggdendro/tests/testthat
ggdendro/tests/testthat/test-2-hclust.R
ggdendro/tests/testthat/Rplots.pdf
ggdendro/tests/testthat/Rplots2.pdf
ggdendro/tests/testthat/Rplots16.pdf
ggdendro/tests/testthat/test-3-tree.R
ggdendro/tests/testthat/Rplots14.pdf
ggdendro/tests/testthat/Rplots4.pdf
ggdendro/tests/testthat/Rplots12.pdf
ggdendro/tests/testthat/test-3-rpart.R
ggdendro/tests/testthat/Rplots9.pdf
ggdendro/tests/testthat/test-6-ggdendrogram.R
ggdendro/tests/testthat/Rplots6.pdf
ggdendro/tests/testthat/Rplots15.pdf
ggdendro/tests/testthat/test-4-clusterplots.R
ggdendro/tests/testthat/Rplots10.pdf
ggdendro/tests/testthat/Rplots7.pdf
ggdendro/tests/testthat/Rplots3.pdf
ggdendro/tests/testthat/Rplots8.pdf
ggdendro/tests/testthat/Rplots5.pdf
ggdendro/tests/testthat/test-1-dendrogram.R
ggdendro/tests/testthat/Rplots13.pdf
ggdendro/tests/testthat/Rplots1.pdf
ggdendro/tests/testthat/Rplots11.pdf
ggdendro/NAMESPACE
ggdendro/NEWS
ggdendro/R
ggdendro/R/rpart.R ggdendro/R/dendro_tree.R ggdendro/R/dendro_data.R ggdendro/R/dendro_rpart.R ggdendro/R/dendrogram.R ggdendro/R/ggdendro-package.R ggdendro/R/ggdendrogram.R
ggdendro/vignettes
ggdendro/vignettes/ggdendro.Rmd
ggdendro/MD5
ggdendro/build
ggdendro/build/vignette.rds
ggdendro/DESCRIPTION
ggdendro/man
ggdendro/man/segment.Rd ggdendro/man/dendro_data.tree.Rd ggdendro/man/treeco.Rd ggdendro/man/dendro_data.rpart.Rd ggdendro/man/labels.rpart.Rd ggdendro/man/theme_dendro.Rd ggdendro/man/is.dendro.Rd ggdendro/man/rpart_segments.Rd ggdendro/man/ggdendrogram.Rd ggdendro/man/get_data_tree_leaf_labels.Rd ggdendro/man/dendro_data.Rd ggdendro/man/ggdendro-package.Rd ggdendro/man/rpart_labels.Rd ggdendro/man/rpartco.Rd ggdendro/man/tree_labels.Rd ggdendro/man/dendrogram_data.Rd ggdendro/man/as.dendro.Rd ggdendro/man/tree_segments.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.