Man pages for ggmix
Variable Selection in Linear Mixed Models for SNP Data
| admixed | Simulated Dataset with 1D Geography |
| gen_structured_model | Simulation Scenario from Bhatnagar et al. (2018+) ggmix paper |
| ggmix | Fit Linear Mixed Model with Lasso or Group Lasso... |
| ggmix_data_object | Constructor functions for the different ggmix objects |
| gic | Generalised Information Criterion |
| gr_eta_lasso_fullrank | Functions related to eta parameter used in optim and kkt... |
| karim | Karim's Simulated Data |
| kkt_check | Check of KKT Conditions for Linear Mixed Model |
| lambdalasso | Estimation of Lambda Sequence for Linear Mixed Model with... |
| lmmlasso | Estimation of Linear Mixed Model with Lasso Penalty |
| logliklasso | Estimation of Log-likelihood for Linear Mixed Model with... |
| plot.ggmix_fit | Plot Method for 'ggmix_fit' object |
| plot.ggmix_gic | Plot the Generalised Information Criteria curve produced by... |
| predict.ggmix_fit | Make predictions from a 'ggmix_fit' object |
| predict.ggmix_gic | Make predictions from a 'ggmix_gic' object |
| print.ggmix_fit | Print Method for Objects of Class 'ggmix_fit' |
| ranef | Extract Random Effects |
| sigma2lasso | Estimation of Sigma2 for Linear Mixed Model with Lasso... |
