View source: R/position-brain.R
| position_brain | R Documentation |
Controls how an atlas's hemispheres and views are arranged in the plot – side by side, stacked, or in a grid – and can zoom each view in on the regions you care about. Pass the result to the 'position' argument of [geom_brain()] (or [annotate_brain()]).
position_brain(
position = "horizontal",
nrow = NULL,
ncol = NULL,
views = NULL,
zoom = NULL,
zoom_pad = 0.05
)
position |
Formula describing the rows ~ columns organisation for cortical atlases (e.g., 'hemi ~ view'). For subcortical/tract atlases, can be "horizontal", "vertical", or a formula with 'type ~ .' where type is extracted from view names like "axial_1" -> "axial". |
nrow |
Number of rows for grid layout. If NULL (default), calculated automatically. Only used for subcortical/tract atlases when position is not a formula. |
ncol |
Number of columns for grid layout. If NULL (default), calculated automatically. Only used for subcortical/tract atlases when position is not a formula. |
views |
Character vector specifying which views to include and their order. If NULL (default), all views are included in their original order. Only applies to subcortical/tract atlases. |
zoom |
Controls per-view zoom. 'NULL'/'FALSE' (default) draws each view at full extent. 'TRUE' zooms each view onto its focus regions; a character vector names the focus regions explicitly. |
zoom_pad |
Fractional padding added around the focus window when 'zoom' is active. Defaults to '0.05' (5%). |
A layout specification to hand to [geom_brain()]'s 'position' argument.
library(ggplot2)
# Cortical atlas with formula
ggplot() +
geom_brain(
atlas = dk(), aes(fill = region),
position = position_brain(. ~ view + hemi),
show.legend = FALSE
)
ggplot() +
geom_brain(
atlas = dk(), aes(fill = region),
position = position_brain(view ~ hemi),
show.legend = FALSE
)
ggplot() +
geom_brain(
atlas = aseg(), aes(fill = region),
position = position_brain(nrow = 2)
)
ggplot() +
geom_brain(
atlas = aseg(), aes(fill = region),
position = position_brain(
views = c("sagittal", "axial_3", "coronal_2"),
nrow = 1
)
)
ggplot() +
geom_brain(
atlas = aseg(), aes(fill = region),
position = position_brain(type ~ .)
)
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