Files in ggsurveillance
Tools for Outbreak Investigation/Infectious Disease Surveillance

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/geom_bar_diverging.R R/geom_vline_year.R R/scale_continuous_diverging.R R/geom_epicurve.R R/guide_axis_nested_date.R R/themes.R R/data.R R/scale_date_limit_days.R R/stat_last_value.R R/geom_epigantt.R R/create_agegroups.R R/geometric_mean.R R/label_skip.R R/scale_cases_5er.R R/geom_bar_range.R R/ggplot_theme_helpers.R R/reexport.R R/align_dates_seasonal.R R/label.R R/scale_discrete_reverse.R R/utils.R R/bin_by_date.R
inst/WORDLIST
inst/doc/Epigantt_with_ggsurveillance.R
inst/doc/Epicurves_with_ggsurveillance.html
inst/doc/Epicurves_with_ggsurveillance.Rmd inst/doc/align_dates_seasonal.Rmd inst/doc/Epigantt_with_ggsurveillance.Rmd
inst/doc/Epigantt_with_ggsurveillance.html
inst/doc/Epicurves_with_ggsurveillance.R
inst/doc/align_dates_seasonal.html
inst/doc/align_dates_seasonal.R
build/vignette.rds
tests/testthat.R tests/spelling.R tests/testthat/test-scale_discrete_reverse.R tests/testthat/test-geometric_mean.R tests/testthat/test-bin_by_date.R tests/testthat/test-geom_bar_diverging.R tests/testthat/test_extras.R tests/testthat/test-geom_vline_year.R tests/testthat/test-geom_epicurve.R tests/testthat/test-label_skip.R tests/testthat/test-label_power10.R tests/testthat/test-geom_bar_range.R tests/testthat/test-stat_last_value.R tests/testthat/setup.R tests/testthat/test-align_and_bin_dates_seasonal.R tests/testthat/test-geom_epigantt.R tests/testthat/test-align_dates_seasonal.R tests/testthat/test-create_agegroups.R
tests/testthat/_snaps/stat_last_value/5-geom-label-last-value-repel-custom.svg
tests/testthat/_snaps/stat_last_value/5-geom-label-last-value-repel-basic.svg
tests/testthat/_snaps/stat_last_value/3-geom-label-last-value-basic.svg
tests/testthat/_snaps/stat_last_value/4-geom-text-last-value-repel-min-segment.svg
tests/testthat/_snaps/stat_last_value/2-geom-text-last-value-basic.svg
tests/testthat/_snaps/stat_last_value/2-geom-text-last-value-labeller.svg
tests/testthat/_snaps/stat_last_value/6-stat-last-value-abs-nudge-date.svg
tests/testthat/_snaps/stat_last_value/1-stat-last-value-basic.svg
tests/testthat/_snaps/stat_last_value/7-stat-last-value-na-values.svg
tests/testthat/_snaps/stat_last_value/3-geom-label-last-value-nudge.svg
tests/testthat/_snaps/stat_last_value/6-stat-last-value-abs-nudge-datetime.svg
tests/testthat/_snaps/stat_last_value/2-geom-text-last-value-percent.svg
tests/testthat/_snaps/stat_last_value/7-stat-last-value-na-at-end.svg
tests/testthat/_snaps/stat_last_value/4-geom-text-last-value-repel-basic.svg
tests/testthat/_snaps/stat_last_value/1-stat-last-value-multiple-lines.svg
tests/testthat/_snaps/geom_epigantt/3-geom-epigantt-full-flip-aes.svg
tests/testthat/_snaps/geom_epigantt/1-geom-epigantt-flip-aes.svg
tests/testthat/_snaps/geom_epigantt/1-geom-epigantt-basic.svg
tests/testthat/_snaps/geom_epigantt/2-geom-epigantt-na.svg
tests/testthat/_snaps/geom_epigantt/3-geom-epigantt-full.svg
tests/testthat/_snaps/scale_discrete_reverse/3-scale-reverse.svg
tests/testthat/_snaps/scale_discrete_reverse/4-scale-reverse.svg
tests/testthat/_snaps/scale_discrete_reverse/1-scale-reverse.svg
tests/testthat/_snaps/scale_discrete_reverse/2-scale-reverse.svg
tests/testthat/_snaps/geom_epicurve/1-geom-epicurve-basic-date.svg
tests/testthat/_snaps/geom_epicurve/6-geom-epicurve-na-true.svg
tests/testthat/_snaps/geom_epicurve/2-geom-epicurve-date-resolutionna.svg
tests/testthat/_snaps/geom_epicurve/4-geom-epicurve-datetime.svg
tests/testthat/_snaps/geom_epicurve/5-geom-epicurve-res-week.svg
tests/testthat/_snaps/geom_epicurve/1-geom-epicurve-basic-date-warn.svg
tests/testthat/_snaps/geom_epicurve/8-stat-bin-date-epiyear.svg
tests/testthat/_snaps/geom_epicurve/8-stat-bin-date-base.svg
tests/testthat/_snaps/geom_epicurve/8-stat-bin-date-isoyear.svg
tests/testthat/_snaps/geom_epicurve/8-stat-bin-date-year.svg
tests/testthat/_snaps/geom_epicurve/7-geom-epicurve-bin-date-no-res.svg
tests/testthat/_snaps/geom_epicurve/7-geom-epicurve-bin-date-res.svg
tests/testthat/_snaps/geom_epicurve/8-stat-bin-date-base-new.svg
tests/testthat/_snaps/geom_epicurve/5-geom-epicurve-res-month.svg
tests/testthat/_snaps/geom_epicurve/3-geom-epicurve-flipped-aes.svg
tests/testthat/_snaps/geom_epicurve/8-stat-bin-date-fill-gaps.svg
tests/testthat/_snaps/geom_epicurve/3-geom-epicurve-facet.svg
tests/testthat/_snaps/geom_epicurve/5-geom-epicurve-res-day.svg
tests/testthat/_snaps/geom_epicurve/3-geom-epicurve-flipped-aes-back.svg
tests/testthat/_snaps/geom_epicurve/6-geom-epicurve-na.svg
tests/testthat/_snaps/geom_bar_range/1-geom-col-range-flip.svg
tests/testthat/_snaps/geom_bar_range/1-geom-col-range-basic.svg
tests/testthat/_snaps/geom_bar_range/2-geom-col-range-position-dodge.svg
tests/testthat/_snaps/geom_bar_range/3-geom-col-range-just-0.svg
tests/testthat/_snaps/geom_bar_range/3-geom-col-range-just-1.svg
tests/testthat/_snaps/geom_bar_diverging/1-geom-bar-diverging-basic-vertical.svg
tests/testthat/_snaps/geom_bar_diverging/10-break-pos-over-limit.svg
tests/testthat/_snaps/geom_bar_diverging/10-break-pos-never-4.svg
tests/testthat/_snaps/geom_bar_diverging/2-geom-bar-diverging-neutral-odd.svg
tests/testthat/_snaps/geom_bar_diverging/8-geom-bar-diverging-na-break-pos2.svg
tests/testthat/_snaps/geom_bar_diverging/7-geom-bar-diverging-continuous.svg
tests/testthat/_snaps/geom_bar_diverging/6-geom-bar-diverging-single-category.svg
tests/testthat/_snaps/geom_bar_diverging/8-geom-bar-diverging-na-default.svg
tests/testthat/_snaps/geom_bar_diverging/9-geom-bar-diverging-force.svg
tests/testthat/_snaps/geom_bar_diverging/9-geom-bar-diverging-force-break-pos3.svg
tests/testthat/_snaps/geom_bar_diverging/7-geom-area-diverging-1.svg
tests/testthat/_snaps/geom_bar_diverging/4-complex-diverging-plot.svg
tests/testthat/_snaps/geom_bar_diverging/1-geom-bar-diverging-basic-horizontal.svg
tests/testthat/_snaps/geom_bar_diverging/8-geom-bar-diverging-na-break-pos1.svg
tests/testthat/_snaps/geom_bar_diverging/2-geom-bar-diverging-neutral-never.svg
tests/testthat/_snaps/geom_bar_diverging/1-geom-bar-diverging-proportion.svg
tests/testthat/_snaps/geom_bar_diverging/5-geom-bar-diverging-weighted.svg
tests/testthat/_snaps/geom_bar_diverging/9-geom-bar-diverging-force-break-pos1.svg
tests/testthat/_snaps/geom_bar_diverging/3-stat-diverging-proportion.svg
tests/testthat/_snaps/geom_bar_diverging/10-break-pos-never-last-level.svg
tests/testthat/_snaps/geom_bar_diverging/9-geom-bar-diverging-force-break-pos2.svg
tests/testthat/_snaps/geom_bar_diverging/3-stat-diverging-totals.svg
tests/testthat/_snaps/geom_bar_diverging/10-break-pos-never-1.svg
tests/testthat/_snaps/geom_bar_diverging/7-geom-area-diverging-2.svg
tests/testthat/_snaps/geom_vline_year/5-geom-hline-year-week.svg
tests/testthat/_snaps/geom_vline_year/3-geom-vline-year-week-mix.svg
tests/testthat/_snaps/geom_vline_year/5-geom-hline-year-basic2.svg
tests/testthat/_snaps/geom_vline_year/4-geom-vline-year-isoweek.svg
tests/testthat/_snaps/geom_vline_year/5-geom-hline-year-epiweek.svg
tests/testthat/_snaps/geom_vline_year/5-geom-hline-year-basic.svg
tests/testthat/_snaps/geom_vline_year/1-geom-vline-year-cont.svg
tests/testthat/_snaps/geom_vline_year/3-geom-vline-year-week.svg
tests/testthat/_snaps/geom_vline_year/4-geom-vline-year-epiweek2.svg
tests/testthat/_snaps/geom_vline_year/1-geom-vline-year-basic.svg
tests/testthat/_snaps/geom_vline_year/2-geom-vline-year-datetime.svg
tests/testthat/_snaps/geom_vline_year/5-geom-hline-year-isoweek.svg
tests/testthat/_snaps/geom_vline_year/4-geom-vline-year-epiweek.svg
tests/testthat/_snaps/geom_vline_year/3-geom-vline-year-day-mix.svg
tests/testthat/_snaps/geom_vline_year/3-geom-vline-year-week2.svg
vignettes/Epicurves_with_ggsurveillance.Rmd vignettes/align_dates_seasonal.Rmd vignettes/Epigantt_with_ggsurveillance.Rmd
data/linelist_hospital_outbreak.rda
data/influenza_germany.rda
data/population_german_states.rda
man/geom_bar_diverging.Rd man/stat_last_value.Rd man/align_dates_seasonal.Rd man/scale_y_cases_5er.Rd man/theme_mod_remove_minor_grid.Rd man/geom_vline_year.Rd man/theme_mod_rotate_axis_labels.Rd man/geom_epigantt.Rd man/guide_axis_nested_date.Rd man/geometric_mean.Rd man/label_date.Rd man/scale_continuous_diverging.Rd man/scale_y_discrete_reverse.Rd man/uncount.Rd man/label_power10.Rd man/geom_col_range.Rd man/bin_by_date.Rd man/linelist_hospital_outbreak.Rd man/label_skip.Rd man/geom_epicurve.Rd man/population_german_states.Rd man/influenza_germany.Rd man/theme_mod_disable_legend.Rd man/create_agegroups.Rd
man/figures/ggsurveillance.png
man/figures/diverging_bar_chart_age_pyramid_readme.png
man/figures/logo.png
man/figures/epigantt_plot_readme.png
man/figures/seasonal_plot_readme.png
man/figures/logo_github_social_media.png
man/figures/logo.svg
man/figures/epicurve_readme.png
man/figures/epicurve_readme.svg
ggsurveillance documentation built on July 2, 2025, 5:09 p.m.