plot.glmmhp: Plot for a 'glmm.hp' object

In glmm.hp: Hierarchical Partitioning of Marginal R2 for Generalized Mixed-Effect Models

Plot for a glmm.hp object

Description

Plot for a glmm.hp object

Usage

## S3 method for class 'glmmhp'
plot(x, plot.perc = FALSE, color = NULL, n = 1, dig = 4, ...)

Arguments

x	A glmm.hp object.
plot.perc	Logical;if TRUE, the bar plot (based on ggplot2 package) of the percentage to individual effects of variables or groups towards total explained variation, the default is FALSE to show plot with original individual effects.
color	Color of variables.
n	Integer; which marginal R2 in output of r.squaredGLMM to plot.
dig	Integer; number of decimal places in Venn diagram.
...	unused

Value

a ggplot object

Author(s)

Jiangshan Lai [e-mail]

Examples

library(MuMIn)
library(lme4)
mod1 <- lmer(Sepal.Length ~ Petal.Length + Petal.Width +(1 | Species), data = iris)
a <- glmm.hp(mod1)
plot(a)
mod3 <- lm(Sepal.Length ~ Petal.Length+Petal.Width,data = iris)
plot(glmm.hp(mod3,type="R2"))
plot(glmm.hp(mod3,commonality=TRUE),color = c("#8DD3C7", "#FFFFB3"))

glmm.hp documentation built on Oct. 26, 2024, 9:06 a.m.