glmmsr: Fit a Generalized Linear Mixed Model

Conduct inference about generalized linear mixed models, with a choice about which method to use to approximate the likelihood. In addition to the Laplace and adaptive Gaussian quadrature approximations, which are borrowed from 'lme4', the likelihood may be approximated by the sequential reduction approximation, or an importance sampling approximation. These methods provide an accurate approximation to the likelihood in some situations where it is not possible to use adaptive Gaussian quadrature.

AuthorHelen Ogden [aut, cre]
Date of publication2016-03-13 11:29:42
MaintainerHelen Ogden <heogden12@gmail.com>
LicenseGPL (>= 2)
Version0.1.1
http://github.com/heogden/glmmsr

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Files

glmmsr
glmmsr/inst
glmmsr/inst/continuous_beliefs.yml
glmmsr/inst/examples
glmmsr/inst/examples/chameleons.R
glmmsr/inst/examples/three_level.R
glmmsr/inst/examples/two_level.R
glmmsr/inst/RcppR6.yml
glmmsr/inst/cluster_graph.yml
glmmsr/inst/doc
glmmsr/inst/doc/glmmsr-vignette.pdf
glmmsr/inst/doc/glmmsr-vignette.Rmd
glmmsr/inst/doc/glmmsr-vignette.R
glmmsr/inst/calibration_parameters.yml
glmmsr/inst/include
glmmsr/inst/include/testingEigen.h
glmmsr/inst/include/NormalBelief.h
glmmsr/inst/include/Quadratic.h
glmmsr/inst/include/BeliefBase.h
glmmsr/inst/include/Basis.h
glmmsr/inst/include/ContinuousBeliefBase.h
glmmsr/inst/include/matrixHelper.h
glmmsr/inst/include/Point.h
glmmsr/inst/include/Family.h
glmmsr/inst/include/ProbitLink.h
glmmsr/inst/include/glmmsr.h
glmmsr/inst/include/LogitLink.h
glmmsr/inst/include/subsetEigen.h
glmmsr/inst/include/accessParameters.h
glmmsr/inst/include/BasisLevel.h
glmmsr/inst/include/ContinuousBelief.h
glmmsr/inst/include/adjacency_list_alt.h
glmmsr/inst/include/CoversBelief.h
glmmsr/inst/include/MixedContinuousBeliefVector.h
glmmsr/inst/include/SparseStore.h
glmmsr/inst/include/counting.h
glmmsr/inst/include/Parameters.h
glmmsr/inst/include/SparseGridTransform.h
glmmsr/inst/include/dependenceGraph.h
glmmsr/inst/include/QuadratureRule.h
glmmsr/inst/include/Binomial.h
glmmsr/inst/include/itemsHelper.h
glmmsr/inst/include/SparseGrid.h
glmmsr/inst/include/FamilyGivenMean.h
glmmsr/inst/include/Graph.h
glmmsr/inst/include/SparseBelief.h
glmmsr/inst/include/IntegratedFunction.h
glmmsr/inst/include/ClusterGraph.h
glmmsr/inst/include/GLMMBelief.h
glmmsr/inst/include/LinkBase.h
glmmsr/inst/include/FamilyBase.h
glmmsr/inst/include/glmmsr
glmmsr/inst/include/glmmsr/RcppR6_pre.hpp
glmmsr/inst/include/glmmsr/RcppR6_support.hpp
glmmsr/inst/include/glmmsr/RcppR6_post.hpp
glmmsr/inst/include/Link.h
glmmsr/inst/include/MixedContinuousBelief.h
glmmsr/inst/include/MultiNormal.h
glmmsr/tests
glmmsr/tests/testthat.R
glmmsr/tests/testthat
glmmsr/tests/testthat/test_utility.R
glmmsr/tests/testthat/test_loglikelihood.R
glmmsr/tests/testthat/pdg_three_level.rds
glmmsr/tests/testthat/test_subformula.R
glmmsr/tests/testthat/test_modify_subexpr.R
glmmsr/tests/testthat/subs_ability_stuff.rds
glmmsr/tests/testthat/test_indexing.R
glmmsr/tests/testthat/pdg_two_level.rds
glmmsr/tests/testthat/test_fit.R
glmmsr/tests/testthat/test_model_frames.R
glmmsr/src
glmmsr/src/MixedContinuousBelief.cpp
glmmsr/src/Makevars
glmmsr/src/ContinuousBeliefBase.cpp
glmmsr/src/NormalBelief.cpp
glmmsr/src/BeliefBase.cpp
glmmsr/src/LinkBase.cpp
glmmsr/src/MixedContinuousBeliefVector.cpp
glmmsr/src/Quadratic.cpp
glmmsr/src/RcppR6.cpp
glmmsr/src/Link.cpp
glmmsr/src/Graph.cpp
glmmsr/src/MultiNormal.cpp
glmmsr/src/Binomial.cpp
glmmsr/src/ClusterGraph.cpp
glmmsr/src/FamilyBase.cpp
glmmsr/src/SparseStore.cpp
glmmsr/src/FamilyGivenMean.cpp
glmmsr/src/SparseGridTransform.cpp
glmmsr/src/counting.cpp
glmmsr/src/SparseGrid.cpp
glmmsr/src/IntegratedFunction.cpp
glmmsr/src/accessParameters.cpp
glmmsr/src/matrixHelper.cpp
glmmsr/src/BasisLevel.cpp
glmmsr/src/Parameters.cpp
glmmsr/src/Point.cpp
glmmsr/src/ProbitLink.cpp
glmmsr/src/ContinuousBelief.cpp
glmmsr/src/Basis.cpp
glmmsr/src/SparseBelief.cpp
glmmsr/src/itemsHelper.cpp
glmmsr/src/QuadratureRule.cpp
glmmsr/src/RcppExports.cpp
glmmsr/src/Family.cpp
glmmsr/src/GLMMBelief.cpp
glmmsr/src/LogitLink.cpp
glmmsr/src/subsetEigen.cpp
glmmsr/NAMESPACE
glmmsr/data
glmmsr/data/two_level.rda
glmmsr/data/three_level.rda
glmmsr/R
glmmsr/R/loglikelihood.R glmmsr/R/IS.R glmmsr/R/modify_subexpr.R glmmsr/R/indexing.R glmmsr/R/glmmFit.R glmmsr/R/control.R glmmsr/R/RcppR6.R glmmsr/R/utility.R glmmsr/R/fit.R glmmsr/R/RcppExports.R glmmsr/R/optimization.R glmmsr/R/glmmsr.R glmmsr/R/splitframe.R glmmsr/R/subformula.R glmmsr/R/model_frames.R
glmmsr/vignettes
glmmsr/vignettes/glmmsr.bib
glmmsr/vignettes/glmmsr-vignette.Rmd
glmmsr/README.md
glmmsr/MD5
glmmsr/build
glmmsr/build/vignette.rds
glmmsr/DESCRIPTION
glmmsr/man
glmmsr/man/print.summaryGlmmFit.Rd glmmsr/man/glmmsr.Rd glmmsr/man/find_lfun_glmm.Rd glmmsr/man/glmmFit.Rd glmmsr/man/glmm.Rd glmmsr/man/find_approximation_name.Rd glmmsr/man/find_modfr_glmm.Rd glmmsr/man/print.glmmFit.Rd glmmsr/man/summary.glmmFit.Rd glmmsr/man/two_level.Rd glmmsr/man/three_level.Rd glmmsr/man/cluster_graph.Rd glmmsr/man/summaryGlmmFit.Rd glmmsr/man/optimize_glmm.Rd glmmsr/man/continuous_beliefs.Rd glmmsr/man/calibration_parameters.Rd

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