Files in glossa
User-Friendly 'shiny' App for Bayesian Species Distribution Models

MD5

NAMESPACE

DESCRIPTION

R/run_glossa.R R/read_validate_files.R R/mod_export_plot.R R/generate_pseudo_absences.R R/mod_file_input_area.R R/process_polygon.R R/bart_functions.R R/process_layers.R R/glossa-package.R R/glossa_analysis.R R/process_presence_absence.R R/utils.R

inst/CITATION

inst/app/ui.R inst/app/global.R inst/app/server.R

inst/app/www/logo_icm.png

inst/app/www/logo_so.png

inst/app/www/logo_prooceans.png

inst/app/www/logo_glossa.png

inst/app/www/logo_csic.png

inst/app/www/logo_glossa.gif

inst/app/www/logo_imares.png

inst/app/Rmd/contact_us.Rmd inst/app/Rmd/documentation.Rmd inst/app/Rmd/lastest_updates.Rmd inst/app/Rmd/how_to_cite.Rmd

inst/extdata/world.gpkg

inst/extdata/testthat_polygon.gpkg

inst/extdata/project_layers_1.zip

inst/extdata/fit_layers.zip

inst/extdata/project_layers_2.zip

inst/extdata/sp1.txt

inst/extdata/testthat_coords.csv

inst/extdata/oceania.gpkg

inst/extdata/testthat_layers.zip

inst/extdata/sp2.csv

build/partial.rdb

tests/testthat.R tests/testthat/test-read_validate_files.R tests/testthat/test-utils.R tests/testthat/test-process_polygon.R tests/testthat/test-cross_validate_model.R tests/testthat/test-glossa_analysis.R tests/testthat/Rplots.pdf tests/testthat/test-process_layers.R tests/testthat/test-process_presence_absence.R tests/testthat/test-bart_functions.R tests/testthat/test-generate_pseudo_absences.R man/get_covariate_names.Rd man/youdensIndex.Rd man/fit_bart_model.Rd man/plot_cv_metrics.Rd man/file_input_area_server.Rd man/misClassError.Rd man/glossa_export.Rd man/glossa_analysis.Rd man/layer_mask.Rd man/read_layers_zip.Rd man/buffer_polygon.Rd man/predict_bart.Rd man/specificity.Rd man/generate_pa_buffer_out.Rd man/cross_validate_model.Rd man/validate_fit_projection_layers.Rd man/getFprTpr.Rd man/invert_polygon.Rd man/generate_pseudo_absences.Rd man/remove_points_polygon.Rd man/generate_pa_target_group.Rd man/export_plot_ui.Rd man/generate_prediction_plot.Rd man/validate_pa_fit_time.Rd man/downloadActionButton.Rd man/generate_cv_folds.Rd man/evaluation_metrics.Rd man/validate_layers_zip.Rd man/optimalCutoff.Rd man/create_coords_layer.Rd man/read_presences_absences_csv.Rd man/variable_importance.Rd man/remove_duplicate_points.Rd man/generate_pa_random.Rd man/export_plot_server.Rd man/run_glossa.Rd man/clean_coordinates.Rd man/read_extent_polygon.Rd man/file_input_area_ui.Rd man/extract_noNA_cov_values.Rd man/plot_cv_folds_points.Rd man/response_curve_bart.Rd man/pa_optimal_cutoff.Rd man/sparkvalueBox.Rd man/contBoyce.Rd man/sensitivity.Rd

glossa documentation built on June 8, 2025, 1:20 p.m.

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