buffer_polygon | Enlarge/Buffer a Polygon |
clean_coordinates | Clean Coordinates of Presence/Absence Data |
create_coords_layer | Create Geographic Coordinate Layers |
cv_bart | Cross-Validation for BART Model |
downloadActionButton | Create a Download Action Button |
export_plot_server | Server Logic for Export Plot Functionality |
export_plot_ui | Create UI for Export Plot Button |
extract_noNA_cov_values | Extract Non-NA Covariate Values |
file_input_area_server | Server-side Logic for Custom File Input |
file_input_area_ui | Custom File Input UI |
fit_bart_model | Fit a BART Model Using Environmental Covariate Layers |
generate_cv_plot | Generate Cross-Validation Plot |
generate_prediction_plot | Generate Prediction Plot |
generate_pseudo_absences | Generate Pseudo-Absence Points Based on Presence Points,... |
get_covariate_names | Get Covariate Names |
getFprTpr | Compute specificity and sensitivity |
glossa_analysis | Main Analysis Function for GLOSSA Package |
glossa_export | Export Glossa Model Results |
invert_polygon | Invert a Polygon |
layer_mask | Apply Polygon Mask to Raster Layers |
misClassError | Misclassification Error |
optimalCutoff | Compute the optimal probability cutoff score |
pa_optimal_cutoff | Optimal Cutoff for Presence-Absence Prediction |
predict_bart | Make Predictions Using a BART Model |
read_extent_polygon | Read and Validate Extent Polygon |
read_layers_zip | Load Covariate Layers from ZIP Files |
read_presences_absences_csv | Read and validate presences/absences CSV file |
remove_duplicate_points | Remove Duplicated Points from a Dataframe |
remove_points_polygon | Remove Points Inside or Outside a Polygon |
response_curve_bart | Calculate Response Curve Using BART Model |
run_glossa | Run GLOSSA Shiny App |
sensitivity | Calculate the sensitivity for a given logit model |
sparkvalueBox | Create a Sparkline Value Box |
specificity | Calculate the specificity for a given logit model |
validate_fit_projection_layers | Validate Fit and Projection Layers |
validate_layers_zip | Validate Layers Zip |
validate_pa_fit_time | Validate Match Between Presence/Absence Files and Fit Layers |
variable_importance | Variable Importance in BART Model |
youdensIndex | Calculate Youden's index |
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