gskat: GEE_KM
Version 1.0

Family based association test via GEE Kernel Machine score test

Browse man pages Browse package API and functions Browse package files

AuthorXuefeng Wang
Date of publication2013-11-04 08:07:19
MaintainerXuefeng Wang <pwxfor@gmail.com>
LicenseGPL (>= 2)
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("gskat")

Man pages

gdata: Sample Data
gskat-internal: Internal gskat Functions
gskat-package: Family based association test via kernel machine regression...
gskat_score: Perform GEE_SKAT Score Test
gskat_score_pert: Perform GEE_SKAT Score Test (perturbation)
gskat_seq: Perform GEE_KM Score Test with sequencing data
gskat_seq_cont: Perform GEE_KM Score Test with sequencing data for continuous...
score_FSKAT_IC_pertu: GEE_SKAT for rare variants
score.RFAM_IC_burden: Burden test based on GEE_SKAT

Functions

Meff_PCA Man page Source code
PCA_cutoff Man page
blockMatrixDiagonal Man page Source code Source code Source code
fit_FSKAT_IC Man page Source code Source code
fit_FSKAT_IC_cont Man page Source code
frechet Man page Source code
gdata Man page
gee_wrap Man page Source code
geeglm_wrap Man page Source code
genoC Man page Source code
gskat Man page
gskat-package Man page
gskat_fit Man page Source code
gskat_score Man page Source code
gskat_score_pert Man page Source code
gskat_seq Man page Source code
gskat_seq_cont Man page Source code
inferCutoff Man page Source code
kindepth Man page Source code
kinship Man page Source code
mybin Man page Source code
myfit.RFAM_IC Man page Source code
mykin Man page Source code
mysqrt Man page Source code Source code Source code
score.RFAM_IC_burden Man page Source code
score_FSKAT_IC_pertu Man page Source code
simpleM Man page Source code

Files

inst
inst/doc
inst/doc/gskat.Rnw
inst/doc/gskat.pdf
inst/doc/gskat.R
NAMESPACE
data
data/gdata.rda
R
R/internal2.R
R/gskat_seq_old.R
R/gskat_cont.R
R/gskat_seq.R
R/binsim.R
R/gskat.R
R/internal1.R
vignettes
vignettes/gskat.Rnw
MD5
DESCRIPTION
man
man/gdata.Rd
man/gskat-package.Rd
man/gskat-internal.Rd
man/gskat_seq_cont.Rd
man/score.RFAM_IC_burden.Rd
man/score_FSKAT_IC_pertu.Rd
man/gskat_score.Rd
man/gskat_seq.Rd
man/gskat_score_pert.Rd
gskat documentation built on May 19, 2017, 4:37 p.m.