Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm

anova_hapassoc | Return likelihood ratio test of haplotype effect |

hapassoc | EM algorithm to fit maximum likelihood estimates of trait... |

hypoDat | Simulated data for a hypothetical binary trait |

hypoDatGeno | Simulated data for a hypothetical genetic SNPs |

logLik_hapassoc | Return log-likelihood |

PreHap | Pre-process the data before fitting it with hapassoc |

summaryHap | Summarize results of the hapassoc function |

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