heatmaply: Interactive Heat Maps Using 'plotly'

Create interactive 'heatmaps' that are usable from the R console, in the 'RStudio' viewer pane, in 'R Markdown' documents, and in 'Shiny' apps. Hover the mouse pointer over a cell to show details or drag a rectangle to zoom. A 'heatmap' is a popular graphical method for visualizing high-dimensional data, in which a table of numbers are encoded as a grid of colored cells. The rows and columns of the matrix are ordered to highlight patterns and are often accompanied by 'dendrograms'. 'Heatmaps' are used in many fields for visualizing observations, correlations, missing values patterns, and more. Interactive 'heatmaps' allow the inspection of specific value by hovering the mouse over a cell, as well as zooming into a region of the 'heatmap' by dragging a rectangle around the relevant area. This work is based on the 'ggplot2' and 'plotly.js' engine. It produces similar 'heatmaps' as 'd3heatmap', with the advantage of speed ('plotly.js' is able to handle larger size matrix), and the ability to zoom from the 'dendrogram' panes.

Author
Tal Galili [aut, cre, cph] (https://www.r-statistics.com), Alan Ocallaghan [ctb] (https://github.com/Alanocallaghan), Yoav Benjamini [ths]
Date of publication
2016-11-06 00:17:15
Maintainer
Tal Galili <tal.galili@gmail.com>
License
GPL-2 | GPL-3
Version
0.6.0
URLs

View on CRAN

Man pages

ggheatmap
Creates a ggplot2 heatmap
heatmaply
Cluster heatmap based on plotly
heatmapr
Creates a heatmapr object
is.heatmapr
Is the object of class heatmapr
side_color_plot
geom_tile for side color plots

Files in this package

heatmaply
heatmaply/inst
heatmaply/inst/doc
heatmaply/inst/doc/heatmaply.Rmd
heatmaply/inst/doc/heatmaply.R
heatmaply/inst/doc/heatmaply.html
heatmaply/NAMESPACE
heatmaply/NEWS
heatmaply/NEWS.md
heatmaply/R
heatmaply/R/ggheatmap.R
heatmaply/R/heatmaply.R
heatmaply/R/heatmapr.R
heatmaply/R/zzz.R
heatmaply/vignettes
heatmaply/vignettes/heatmaply.Rmd
heatmaply/README.md
heatmaply/MD5
heatmaply/build
heatmaply/build/vignette.rds
heatmaply/DESCRIPTION
heatmaply/ChangeLog
heatmaply/man
heatmaply/man/heatmapr.Rd
heatmaply/man/ggheatmap.Rd
heatmaply/man/side_color_plot.Rd
heatmaply/man/heatmaply.Rd
heatmaply/man/is.heatmapr.Rd