QTLMAS: Simulated Data Set for the QTLMAS 2009 Workshop
In hglm.data: Data for the 'hglm' Package
Description
Format
Source
References
Description
The data was simulated for the QTLMAS 2009 workshop in Wageningen, The Netherlands. The data was made available at http://www.qtlmas2009.wur.nl/UK/Dataset/ and consists of markers, trait values and pedigree information. The original data set consisted of several traits and markers from several chromosomes, whereas the current data set included in this package consists of one trait ("P265"), pedigree information and data from 90 markers on chromosome number 1. There are 2025 individuals in the pedigree where 1000 individuals have trait values.
Format
A matrix containing 1000 rows and 2116 columns. The first column contains the trait values.
Columns 2 to 2026 contains matrix Z, i.e. the pedigree information (as the Colesky factorization of the additive relationship matrix).
Columns 2027 to 2116 contains matrix Z.marker, i.e. the marker information for the 90 markers on chromosome 1.
Source
QTLMAS 2009 Workshop http://www.qtlmas2009.wur.nl/UK/Dataset/
References
Coster, A., Bastiaansen J., Calus M., Maliepaard C. and Bink M. 2009. QTLMAS 2009: Simulated dataset. (submitted)
hglm.data documentation built on May 1, 2019, 6:34 p.m.
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Description Format Source References
Description
The data was simulated for the QTLMAS 2009 workshop in Wageningen, The Netherlands. The data was made available at http://www.qtlmas2009.wur.nl/UK/Dataset/ and consists of markers, trait values and pedigree information. The original data set consisted of several traits and markers from several chromosomes, whereas the current data set included in this package consists of one trait ("P265"), pedigree information and data from 90 markers on chromosome number 1. There are 2025 individuals in the pedigree where 1000 individuals have trait values.
Format
A matrix containing 1000 rows and 2116 columns. The first column contains the trait values. Columns 2 to 2026 contains matrix Z, i.e. the pedigree information (as the Colesky factorization of the additive relationship matrix). Columns 2027 to 2116 contains matrix Z.marker, i.e. the marker information for the 90 markers on chromosome 1.
Source
QTLMAS 2009 Workshop http://www.qtlmas2009.wur.nl/UK/Dataset/
References
Coster, A., Bastiaansen J., Calus M., Maliepaard C. and Bink M. 2009. QTLMAS 2009: Simulated dataset. (submitted)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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