chr1qseg: Copy number data along a segment of the q arm of chromosome 1

Description Usage Format

Description

.Rdata object containing copy number probes from TCGA at 400 locations (given in 'loc', which is number of base pairs from end of chromosome arm) on the q arm of chromosome 1 for 92 long term survivors 'X' and 138 short term survivors 'Y' of glioblastoma multiforme. Around 3% of the values are missing.

Usage

1

Format

A list containing X, the n=92 by p=400 matrix of copy number measurements for the n=92 long-term survivors, Y, the m=138 by p=400 matrix of copy number measurements for the m=138 short-term survivors, and loc, which gives the locations of the 400 measurements in number of base pairs from the end of the q arm of chromosome 1.


highD2pop documentation built on May 29, 2017, 6:09 p.m.