genotypes: Genotypes of individuals scored at different loci
In hiphop: Parentage Assignment using Bi-Allelic Genetic Markers
Description
Usage
Format
Author(s)
Source
Description
A dataset containing genotypes of 1407 superb fairy wrens (Malurus cyaneus)
from five cohorts (breeding seasons 2014-2018) from the Australian National Botanic Garden.
Each individual (rows) is scored at 1376 loci (columns) with the scores meaning:
0: homozygotes at common allele; 1: homozygote at rare allele and
2: heterozygotes; NA: locus could not be scored.
Usage
1
Format
A data frame with 1407 rows (individuals) and 1376 variables (loci)
Author(s)
Andrew Cockburn, andrew.cockburn@anu.edu.au
Source
Cockburn et al. (2020) HIPHOP: improved paternity assignment among
close relatives using a simple exclusion method for biallelic markers.
Molecular Ecology Resources, in revision.
hiphop documentation built on Aug. 19, 2020, 5:07 p.m.
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Description Usage Format Author(s) Source
Description
A dataset containing genotypes of 1407 superb fairy wrens (Malurus cyaneus) from five cohorts (breeding seasons 2014-2018) from the Australian National Botanic Garden. Each individual (rows) is scored at 1376 loci (columns) with the scores meaning: 0: homozygotes at common allele; 1: homozygote at rare allele and 2: heterozygotes; NA: locus could not be scored.
Usage
1 |
Format
A data frame with 1407 rows (individuals) and 1376 variables (loci)
Author(s)
Andrew Cockburn, andrew.cockburn@anu.edu.au
Source
Cockburn et al. (2020) HIPHOP: improved paternity assignment among close relatives using a simple exclusion method for biallelic markers. Molecular Ecology Resources, in revision.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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