hoa: Higher Order Likelihood Inference

Performs likelihood-based inference for a wide range of regression models. Provides higher-order approximations for inference based on extensions of saddlepoint type arguments as discussed in the book Applied Asymptotics: Case Studies in Small-Sample Statistics by Brazzale, Davison, and Reid (2007).

AuthorR port by Alessandra R. Brazzale <alessandra.brazzale@unipd.it>, following earlier work by Douglas Bates. The function tem is based on work by Anthony Davison <Anthony.Davison@epfl.ch>
Date of publication2015-08-12 00:35:40
MaintainerAlex-Antoine Fortin <alex@fortin.bio>
LicenseGPL (>= 2) | file LICENCE
Version2.1.4
http://www.r-project.org
http://statwww.epfl.ch/AA/

View on CRAN

Man pages

aids: AIDS Symptoms and AZT Use Data

airway: Airway Data

all.profiles.nlreg: Support for function 'profile.nlreg'

anova.rsm: ANOVA Table for a RSM Object

anova.rsmlist: Use anova() on a "rsmlist" object

babies: Crying Babies Data

C1: Six Herbicide Data Sets

chlorsulfuron: Chlorsulfuron Data

coef.nlreg: Use coef() on a 'nlreg' object

cond: Approximate Conditional Inference - Generic Function

cond.glm: Approximate Conditional Inference for Logistic and Loglinear...

cond.object: Approximate Conditional Inference Object

cond.rsm: Approximate Conditional Inference in Regression-Scale Models

contour.all.nlreg.profiles: Contour Method for 'nlreg' Objects

daphnia: 'Daphnia Magna' Data

darwin: Darwin's Data on Growth Rates of Plants

Dmean: Differentiate the Mean Function of a Nonlinear Model

dormicum: Dormicum Data

Dvar: Differentiate the Variance Function of a Nonlinear Model

expInfo: Returns the Expected Information Matrix - Generic Function

expInfo.nlreg: Expected Information Matrix for 'nlreg' Objects

family.cond: Use family() on a "cond" object

family.rsm: Use family() on a "rsm" object

family.rsm.object: Family Object for Regression-Scale Models

family.summary.cond: Use family() on a "summary.cond" object

fitted.nlreg: Use fitted() on a 'nlreg' object

fraudulent: Fraudulent Automobile Insurance Claims Data

fungal: Fungal Infections Treatment Data

helicopter: Helicopter Data

hoa: Higher Order Likelihood Inference

houses: House Price Data

Huber: Huber's Least Favourable Distribution

logLik.nlreg: Compute the Log Likelihood for Nonlinear Heteroscedastic...

logLik.rsm: Compute the Log Likelihood for Regression-Scale Models

make.family.rsm: Support for RSM Family Functions

marg.object: Approximate Marginal Inference Object

metsulfuron: Metsulfuron Methyl Data

mpl: Maximum Adjusted Profile Likelihood Estimation - Generic...

mpl.nlreg: Maximum Adjusted Profile Likelihood Estimates for a 'nlreg'...

mpl.object: Maximum Adjusted Profile Likelihood Object

nlreg: Fit a Nonlinear Heteroscedastic Model via Maximum Likelihood

nlreg.contours.object: Contour Object for Nonlinear Heteroscedastic Models

nlreg.diag: Nonlinear Heteroscedastic Model Diagnostics

nlreg.object: Nonlinear Heteroscedastic Model Object

nlreg.profile.objects: Profile Objects for Nonlinear Heteroscedastic Models

nuclear: Nuclear Power Station Data

obsInfo: Returns the Observed Information Matrix - Generic Function

obsInfo.nlreg: Observed Information Matrix for 'nlreg' Objects

param: Extract All Parameters from a Model - Generic Function

param.nlreg: Use param() on a 'nlreg' object

plot.cond: Generate Plots for an Approximate Conditional Inference...

plot.fr: Plot a fr Object

plot.marg: Generate Plots for an Approximate Marginal Inference Object

plot.nlreg.contours: Use plot() on a 'nlreg.contours' object

plot.nlreg.diag: Diagnostic Plots for Nonlinear Heteroscedastic Models

plot.nlreg.profiles: Use plot() on a 'profile.nlreg' and 'all.profiles.nlreg'...

print.cond: Use print() on a "cond" object

print.family.rsm: Use print() on a "family.rsm" object

print.marg: Use print() on a "marg" object

print.mpl: Use print() on a 'mpl' object

print.nlreg: Use print() on a 'nlreg' object

print.nlreg.contours: Use print() on a 'nlreg.contours' object

print.nlreg.profiles: Use print() on a 'nlreg.profile' and 'all.nlreg.profiles'...

print.rsm: Use print() on a "rsm" object

print.summary.cond: Use print() on a "summary.cond" object

print.summary.marg: Use print() on a "summary.marg" object

print.summary.mpl: Use print() on a 'summary.mpl' object

print.summary.nlreg: Use print() on a 'summary.nlreg' object

print.summary.nlreg.profiles: Use print() on a 'summary.nlreg.profile' and...

print.summary.rsm: Use print() on a "summary.rsm" object

profile.nlreg: Profile Method for 'nlreg' Objects

qStheta: Support for 'nlreg' package of 'hoa' bundle

rabbits: Rabbits Data

residuals.nlreg: Use residuals() on a 'nlreg' object

residuals.rsm: Compute Residuals for Regression-Scale Models

ria: Radioimmunoassay Data

rsm: Fit a Regression-Scale Model

rsm.diag: Diagnostics for Regression-Scale Models

rsm.diag.plots: Diagnostic Plots for Regression-Scale Models

rsm.dispersion: Support for Functions rsm.fit and rsm.surv

rsm.distributions: RSM Family Support Object

rsm.families: Generate a RSM Family Object

rsm.fit: Fit a Regression-Scale Model Without Computing the Model...

rsm.null: Fit an Empty Regression-Scale Model

rsm.object: Regression-Scale Model Object

rsm.surv: Fit a Regression-Scale Model Without Computing the Model...

summary.all.nlreg.profiles: Summary Method for Objects of Class 'all.nlreg.profiles'

summary.cond: Summary Method for Objects of Class "cond"

summary.fr: Likelihood-Based Confidence Intervals Based on fr Object

summary.marg: Summary Method for Objects of Class "marg"

summary.mpl: Summary Method for 'mpl' Objects

summary.nlreg: Summary Method for Nonlinear Heteroscedastic Models

summary.nlreg.profile: Summary Method for Objects of Class 'nlreg.profile'

summary.rsm: Summary Method for Regression-Scale Models

tem: Tangent exponential model: Higher Order Likelihood...

update.rsm: Update and Re-fit a RSM Model Call

urine: Urine Data

var2cor: Convert Covariance Matrix to Correlation Matrix - Generic...

var2cor.nlregmpl: Use var2cor() on a 'nlreg' and 'mpl' object

vcov.rsm: Calculate Variance-Covariance Matrix for a Fitted RSM Model

venice: Sea Level Data

Functions

aids Man page
airway Man page
all.nlreg.profiles.object Man page
all.profiles.nlreg Man page
anova.rsm Man page
anova.rsmlist Man page
babies Man page
C1 Man page
C2 Man page
C3 Man page
C4 Man page
chlorsulfuron Man page
coef.nlreg Man page
cond Man page
cond.glm Man page
cond.object Man page
cond.rsm Man page
contour.all.nlreg.profiles Man page
daphnia Man page
darwin Man page
dHuber Man page
Dmean Man page
dormicum Man page
Dvar Man page
expInfo Man page
expInfo.nlreg Man page
extreme Man page
family.cond Man page
family.rsm Man page
family.rsm.object Man page
family.summary.cond Man page
fitted.nlreg Man page
fitted.values.nlreg Man page
fraser.reid Man page
fraudulent Man page
fungal Man page
helicopter Man page
hoa Man page
houses Man page
Huber Man page
lik.ci Man page
logistic Man page
logLik.nlreg Man page
logLik.rsm Man page
logWeibull Man page
M2 Man page
M4 Man page
make.family.rsm Man page
marg.object Man page
metsulfuron Man page
mpl Man page
mpl.nlreg Man page
mpl.object Man page
nlreg Man page
nlreg.contours.object Man page
nlreg.diag Man page
nlreg.diag.plots Man page
nlreg.object Man page
nlreg.profile.object Man page
nuclear Man page
obsInfo Man page
obsInfo.nlreg Man page
param Man page
param.nlreg Man page
pHuber Man page
plot.all.nlreg.profiles Man page
plot.cond Man page
plot.fr Man page
plot.marg Man page
plot.nlreg.contours Man page
plot.nlreg.diag Man page
plot.nlreg.profile Man page
plot.rsm Man page
print.all.nlreg.profiles Man page
print.cond Man page
print.family.rsm Man page
print.marg Man page
print.mpl Man page
print.nlreg Man page
print.nlreg.contours Man page
print.nlreg.profile Man page
print.nlreg.profiles Man page
print.rsm Man page
print.summary.all.nlreg.profiles Man page
print.summary.cond Man page
print.summary.marg Man page
print.summary.mpl Man page
print.summary.nlreg Man page
print.summary.nlreg.profile Man page
print.summary.nlreg.profiles Man page
print.summary.rsm Man page
profile.nlreg Man page
qhat.nlreg Man page
qHuber Man page
rabbits Man page
resid.nlreg Man page
residuals.nlreg Man page
residuals.rsm Man page
rHuber Man page
ria Man page
rsm Man page
rsm.diag Man page
rsm.diag.plots Man page
rsm.dispersion Man page
rsm.distributions Man page
rsm.families Man page
rsm.fit Man page
rsm.null Man page
rsm.object Man page
rsm.surv Man page
Shat.nlreg Man page
student Man page
summary.all.nlreg.profiles Man page
summary.cond Man page
summary.fr Man page
summary.marg Man page
summary.mpl Man page
summary.nlreg Man page
summary.nlreg.profile Man page
summary.rsm Man page
tem Man page
theta.deriv Man page
update.rsm Man page
urine Man page
var2cor Man page
var2cor.mpl Man page
var2cor.nlreg Man page
var2cor.summary.mpl Man page
var2cor.summary.nlreg Man page
vcov.rsm Man page
venice Man page

Files

hoa
hoa/COPYING
hoa/inst
hoa/inst/CITATION
hoa/inst/margdemo.R
hoa/inst/doc
hoa/inst/doc/Rnews-paper.Rnw
hoa/inst/doc/Rnews-paper.R
hoa/inst/doc/Rnews-paper.pdf
hoa/NAMESPACE
hoa/data
hoa/data/fraudulent.rda
hoa/data/nuclear.rda
hoa/data/C4.rda
hoa/data/C3.rda
hoa/data/helicopter.rda
hoa/data/dormicum.rda
hoa/data/babies.rda
hoa/data/houses.rda
hoa/data/M2.rda
hoa/data/C1.rda
hoa/data/daphnia.rda
hoa/data/C2.rda
hoa/data/venice.rda
hoa/data/ria.rda
hoa/data/chlorsulfuron.rda
hoa/data/airway.rda
hoa/data/darwin.rda
hoa/data/aids.rda
hoa/data/urine.rda
hoa/data/metsulfuron.rda
hoa/data/fungal.rda
hoa/data/rabbits.rda
hoa/data/M4.rda
hoa/R
hoa/R/cond.R hoa/R/nlreg.R hoa/R/marg.R hoa/R/tem.R
hoa/vignettes
hoa/vignettes/Rnews-paper.Rnw
hoa/MD5
hoa/build
hoa/build/vignette.rds
hoa/DESCRIPTION
hoa/LICENCE
hoa/man
hoa/man/print.summary.marg.Rd hoa/man/expInfo.Rd hoa/man/summary.marg.Rd hoa/man/print.family.rsm.Rd hoa/man/summary.nlreg.Rd hoa/man/update.rsm.Rd hoa/man/rsm.diag.plots.Rd hoa/man/profile.nlreg.Rd hoa/man/logLik.rsm.Rd hoa/man/cond.rsm.Rd hoa/man/var2cor.nlregmpl.Rd hoa/man/anova.rsmlist.Rd hoa/man/metsulfuron.Rd hoa/man/summary.mpl.Rd hoa/man/print.nlreg.Rd hoa/man/fitted.nlreg.Rd hoa/man/anova.rsm.Rd hoa/man/chlorsulfuron.Rd hoa/man/print.summary.mpl.Rd hoa/man/print.nlreg.profiles.Rd hoa/man/marg.object.Rd hoa/man/cond.Rd hoa/man/param.Rd hoa/man/summary.rsm.Rd hoa/man/print.summary.nlreg.Rd hoa/man/cond.object.Rd hoa/man/family.summary.cond.Rd hoa/man/fraudulent.Rd hoa/man/family.cond.Rd hoa/man/nlreg.object.Rd hoa/man/logLik.nlreg.Rd hoa/man/daphnia.Rd hoa/man/coef.nlreg.Rd hoa/man/rsm.families.Rd hoa/man/all.profiles.nlreg.Rd hoa/man/mpl.Rd hoa/man/Dmean.Rd hoa/man/rsm.dispersion.Rd hoa/man/plot.nlreg.profiles.Rd hoa/man/cond.glm.Rd hoa/man/urine.Rd hoa/man/vcov.rsm.Rd hoa/man/fungal.Rd hoa/man/babies.Rd hoa/man/rsm.null.Rd hoa/man/nlreg.profile.objects.Rd hoa/man/aids.Rd hoa/man/tem.Rd hoa/man/residuals.nlreg.Rd hoa/man/rsm.object.Rd hoa/man/rsm.diag.Rd hoa/man/param.nlreg.Rd hoa/man/print.rsm.Rd hoa/man/nlreg.contours.object.Rd hoa/man/print.mpl.Rd hoa/man/summary.cond.Rd hoa/man/ria.Rd hoa/man/plot.nlreg.diag.Rd hoa/man/helicopter.Rd hoa/man/expInfo.nlreg.Rd hoa/man/obsInfo.nlreg.Rd hoa/man/plot.cond.Rd hoa/man/make.family.rsm.Rd hoa/man/rsm.Rd hoa/man/var2cor.Rd hoa/man/C1.Rd hoa/man/plot.marg.Rd hoa/man/Dvar.Rd hoa/man/mpl.object.Rd hoa/man/print.cond.Rd hoa/man/dormicum.Rd hoa/man/rsm.distributions.Rd hoa/man/summary.all.nlreg.profiles.Rd hoa/man/nlreg.Rd hoa/man/contour.all.nlreg.profiles.Rd hoa/man/venice.Rd hoa/man/rabbits.Rd hoa/man/Huber.Rd hoa/man/print.summary.nlreg.profiles.Rd hoa/man/nuclear.Rd hoa/man/plot.fr.Rd hoa/man/summary.nlreg.profile.Rd hoa/man/houses.Rd hoa/man/rsm.fit.Rd hoa/man/summary.fr.Rd hoa/man/plot.nlreg.contours.Rd hoa/man/hoa.Rd hoa/man/residuals.rsm.Rd hoa/man/airway.Rd hoa/man/mpl.nlreg.Rd hoa/man/family.rsm.object.Rd hoa/man/print.marg.Rd hoa/man/family.rsm.Rd hoa/man/qStheta.Rd hoa/man/print.summary.rsm.Rd hoa/man/nlreg.diag.Rd hoa/man/print.nlreg.contours.Rd hoa/man/rsm.surv.Rd hoa/man/darwin.Rd hoa/man/obsInfo.Rd hoa/man/print.summary.cond.Rd
hoa/CHANGES

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