Man pages for hscovar
Calculation of Covariance Between Markers for Half-Sib Families
| AR1 | Correlation matrix of an autoregressive model of order 1 |
| calcvar | Variance of estimator |
| coeff.beta.k | Ratio of expected value to variance of estimator |
| CovarMatrix | Calculation of covariance matrices from maternal and paternal... |
| CovMat | Calculation of covariance or correlation matrix |
| ExpectMat | Expected value of paternally inherited allele |
| Haplo2Geno | Conversion of haplotypes into genotypes |
| H.sire | testdata: sire haplotypes |
| LDdam | Calculation of maternal LD matrix |
| LDsire | Calculation of paternal LD matrix |
| matLD | testdata: maternal linkage disequilibrium |
| pos.chr | testdata: genetic map positions |
| pwr.normtest | Probability under alternative hypothesis (power) |
| pwr.snpblup | Wrapper function for sample size calculation |
| search.best.n.bisection | Method of bisection for estimating optimal sample size |
| simpleM | Calculation of effective number of independent tests |
| startvalue | Start value for estimating optimal sample size |
| tagSNP | tagSNP |
| testdata | Description of the testdata |
