| aggregate | aggregate hyperSpec objects |
| apply | apply Computes summary statistics for the spectra of a... |
| Arith | Arithmetical Operators for hyperSpec objects |
| asdataframe | Conversion of a hyperSpec object into a data.frame or matrix... |
| as.hyperSpec | as.hyperSpec: convenience conversion functions |
| barbiturates | Barbiturates Spectra from .spc example files A time series of... |
| baselines | Polynomial Baseline Fitting These functions fit polynomal... |
| bind | Binding hyperSpec Objects |
| chk.hy | Validation of hyperSpec objects |
| chondro | Raman spectra of 2 Chondrocytes in Cartilage A Raman-map... |
| collapse | Collapse hyperSpec objects |
| colSums | colSums, colMeans, rowSums and rowMeans functions for... |
| Comparison | Comparison of hyperSpec objects |
| count_lines | count lines (of an ASCII file) |
| cov | Covariance matrices for hyperSpec objects |
| decomposition | Convert Principal Component Decomposition or the like into a... |
| dim | The Number of Rows (Spectra), Columns, and Data Points per... |
| dimnames | dimnames for hyperSpec objects |
| dollarnames | command line completion for $ |
| dot-cluster.wavelengths | Find clusters of approximately equal wavelengths |
| dot-collapse.equal | Try finding groups of hyperSpec objects with (approximately)... |
| dot-fileio.optional | Helper function to harmonize treatment of file import results |
| dot-fix_spc_colnames | Ensure that the spectra matrix has the wavelengths in column... |
| dot-read.spe.xml | Read XML footer from SPE file format version 3.0 |
| dot-read.spe.xml_string | .read.spe.xml_string |
| droplevels-hyperSpec-method | droplevels for hyperSpec object |
| empty | Empty hyperSpec object |
| extractreplace | Extract and Replace parts of hyperSpec objects |
| flu | Quinine Fluorescence Spectra Fluorescence spectra of... |
| Future-functions | Future functions |
| guess.wavelength | guess wavelengths from character vector |
| hyperSpec-class | Class "hyperSpec" This class handles hyperspectral data sets,... |
| hyperSpec-package | Package hyperSpec |
| initialize | Creating a hyperSpec Object |
| labels | Get and Set Labels of a hyperSpec Object 'value' may be a... |
| laser | Laser Emission A time series of an unstable laser emission. |
| levelplot | Plot a Map and Identify/Select Spectra in the Map 'levelplot'... |
| makeraster | makeraster |
| map-sel-poly | Interactively select a polygon (grid graphics) and highlight... |
| mark.dendrogram | Mark groups in 'hclust' dendrograms |
| markpeak | Mark peak Marks location of the _first_ spectrum at the data... |
| math | Math Functions for hyperSpec Objects |
| mean_sd | Mean and Standard Deviation Calculate mean and standard... |
| merge | Merge hyperSpec objects |
| normalize01 | normalization for mixed colors |
| options | Options for package hyperSpec Functions to access and set... |
| orderwl | Sorting the Wavelengths of a hyperSpec Object Rearranges the... |
| palettes | Matlab-like Palettes Two palettes going from blue over green... |
| paracetamol | Paracetamol Spectrum A Raman spectrum of a paracetamol... |
| pearson.dist | Distance based on Pearson's R squared |
| plot | Plotting hyperSpec Objects |
| plotc | Calibration- and Timeseries Plots, Depth-Profiles and the... |
| plotmat | Plot spectra matrix |
| plotspc | Plotting Spectra Plot the spectra of a 'hyperSpec' object,... |
| qplotc | Spectra plotting with ggplot2 |
| qplotmap | Spectra plotting with ggplot2 |
| qplotmix | Plot multivariate data into colour channels |
| qplotmixmap | qplotmap with colour mixing for multivariate overlay |
| qplotspc | Spectra plotting with ggplot2 |
| quickdf | Quick data frame. Experimental version of 'as.data.frame'... |
| rbind.fill | Bind matrices by row, and fill missing columns with NA |
| read.asc.Andor | File Import Andor Solis |
| read.asc.PerkinElmer | File import filter PerkinElmer ASCII spectra |
| read.ENVI | Import of ENVI data as hyperSpec object |
| read-ini | Read INI files |
| read.jdx | JCAMP-DX Import for Shimadzu Library Spectra |
| read.mat.Cytospec | Import for Cytospec mat files |
| read-spc | Import for Thermo Galactic's spc file format These functions... |
| read-spc-Kaiser | read Kaiser .spc files |
| read.spe | Import WinSpec SPE file |
| read.txt.Horiba | Import Horiba Labspec exported ASCII files |
| read.txt.Renishaw | import Raman measurements from Renishaw ASCII-files |
| read.txt.Shimadzu | Reads Shimadzu GCxGC-qMS - Spectra Files (.txt) as exported... |
| read.txt.Witec | File Import Witec Raman |
| rmmvnorm | Multivariate normal random numbers |
| sample | Random Samples and Permutations Take a sample of the... |
| scale | Center and scale hyperSpec object |
| seq | Sequence generation along spectra or wavelengths This... |
| show | Convert a hyperSpec object to character strings for Display... |
| spc-bin | Wavelength Binning In order to reduce the spectral resolution... |
| spc-identify | Identifying Spectra and Spectral Data Points This function... |
| spc-loess | loess smoothing interpolation for spectra Spectra can be... |
| spc.NA.approx | Impute missing data points |
| spc-rubberband | Rubberband baseline correction |
| spc-spline | Spectral smoothing by splines |
| split | Split a hyperSpec object according to groups 'split' divides... |
| subset | subset |
| summary | The functions |
| sweep | Sweep Summary Statistic out of an hyperSpec Object 'sweep'... |
| textio | Import/export of hyperSpec objects to/from ASCII files A... |
| trellis.factor.key | Color coding legend for factors Modifies a list of lattice... |
| unittests | hyperSpec unit tests |
| vanderMonde | Function evaluation on hyperSpec objects |
| wc | line/word/character count of ASCII files |
| wl | Getting and Setting the Wavelength Axis 'wl' returns the... |
| wl2i | Conversion between Wavelength and Spectra Matrix Column Index... |
| wlconv | Convert different wavelength units |
| wl.eval | Evaluate function on wavelengths of hyperSpec object |
