contract: contract

In hypergate: Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry

contract

Description

Test (some) possible contractions of the hyperrectangle

Usage

contract(
  par = par,
  xp_pos = envir$xp_pos,
  state_pos = envir$state_pos,
  xp_neg = envir$xp_neg,
  state_neg = envir$state_neg,
  n = envir$n,
  TP = envir$TP,
  TN = envir$TN,
  beta = envir$beta2,
  envir = parent.frame()
)

Arguments

par	Current parametrization of the hyperrectangle
xp_pos	Expression matrix for positive events
state_pos	State vector of the positive events
xp_neg	Expression matrix for negative events
state_neg	State vector of the negative events
n	passed to f
TP	integer: current number of TP
TN	integer: current number of TN
beta	Passed from the top-level function
envir	Current environment of the optimization

hypergate documentation built on Aug. 31, 2023, 5:12 p.m.