Man pages for iccCounts
Intraclass Correlation Coefficient for Count Data

AFCD34+ count cell data
DispersionTestDispersion test for GLMM
EPPSparrow fledglings paternity data
fit_model_conEstimates GLMM. Concordance setting.
fit_model_repEstimates GLMM. Repeatability setting.
GOF_checkGoodness of fit for GLMM
GrimsoTick counts data
ICCPrints the intraclass correlation coefficient
icc_countsIntraclass correlation coefficient (ICC) for count data
plot_BABland-Altman plot
plot.GOFGoodness of fit plots
r_est_conICC concordance
r_est_con_ziICC concordance for zero-inflated models
r_est_repICC repeatability
r_est_rep_ziICC repeatability for zero-inflated models
r_NB1ICC for Negative Binomial with additive extradispersion....
r_NB1_2ICC for Negative Binomial with additive extradispersion....
r_NB2ICC for Negative Binomial with proportional extradispersion....
r_NB2_2ICC for Negative Binomial with proportional extradispersion....
r_PoisICC Poisson model. Repeatability setting
r_Pois2ICC Poisson model. Concordance setting
rqrRQR for GLMM Computes the randomized quantile residuals for...
rqr_nb1RQR for NegBin1 GLMM Computes the randomized quantile...
rqr_nb2RQR for NegBin2 GLMM Computes the randomized quantile...
rqr_poisRQR for Poisson GLMM Computes the randomized quantile...
rqr_zinb1RQR for ZINB1 GLMM Computes the randomized quantile residuals...
rqr_zinb2RQR for ZINB2 GLMM Computes the randomized quantile residuals...
rqr_zipRQR for ZIP GLMM Computes the randomized quantile residuals...
r_ZINB1ICC for Zero-Inflated Negative Binomial with additive...
r_ZINB1_2ICC for Zero-Inflated Negative Binomial with additive...
r_ZINB2ICC for Zero-Inflated Negative Binomial with proportional...
r_ZINB2_2ICC for Zero-Inflated Negative Binomial with proportional...
r_ZIPICC Zero-Inflated Poisson model. Repeatability setting
r_ZIP2ICC Zero-Inflated Poisson model. Concordance setting
se_r_NB1ICC standard error for Negative Binomial with a additive...
se_r_NB1_2ICC standard error for Negative Binomial with additive...
se_r_NB2ICC standard error for Negative Binomial with proportional...
se_r_NB2_2ICC standard error for Negative Binomial with proportional...
se_r_PoisICC standard error for Poisson model. Repeatability setting
se_r_Pois2ICC standard error for Poisson model. Concordance setting
se_r_ZINB1ICC standard error for Zero-Inflated Negative Binomial with a...
se_r_ZINB1_2ICC standard error for Zero-Inflated Negative Binomial with...
se_r_ZINB2ICC standard error for Zero-Inflated Negative Binomial with...
se_r_ZINB2_2ICC standard error for Zero-Inflated Negative Binomial with...
se_r_ZIPICC standard error for Zero-Inflated Poisson model....
se_r_ZIP2ICC standard error for Zero-Inflated Poisson model....
VarCompGLMM variance components
ZeroTestZero-Inflation test for GLMM
iccCounts documentation built on June 9, 2022, 5:06 p.m.