Man pages for idmodelr
Infectious Disease Model Library and Utilities

add_pointer_structAdds Pointer Structure to R objects
aggregate_modelA Function to Apply Multiple Aggregations to Model Output
aggregate_model_internalAn Internal Function to Aggregate Model Output Using other...
combine_strat_model_outputReduces the Dimensionality of a Stratified Model
combine_to_age_modelCombine an Infectious Disease Model To a Demographic Model
estimate_norm_dist_from_ciA Function to Estimate a Normal Distribution from Credible or...
gather_strat_multi_variableA Function to Gather Multiple Stratified Variables into a...
gather_strat_variableA Function to Gather a Stratified Variable into a Tidy Format
generate_parameter_permutationsA Function to Generate Parameter Permutations
idmodelr-packageidmodelr: Infectious Disease Model Library and Utilities
model_detailsModel Details
model_df_to_vectorExtracts a Single Column, Summarises if from Simulation
parameter_detailsParameter Details
plot_modelPlot Compartment Populations over Time for a Model Simulation
required_parametersLookup the Details of Parameters Required by a Model
scenario_analysisA Function to Perform Scenario Analysis for a Generic Model...
SEI_demographics_odeSusceptible-Exposed-Infected Model with Simple Demographics
SEI_odeSusceptible-Exposed-Infected Model
SEIR_demographics_odeSusceptible-Exposed-Infected-Recovered Model with Simple...
SEIR_odeSusceptible-Exposed-Infected-Recovered Model
SEIRS_demographics_odeSusceptible-Exposed-Infected-Recovered-Susceptible Model with...
SEIRS_odeSusceptible-Exposed-Infected-Recovered-Susceptible Model
SEIS_demographics_odeSusceptible-Exposed-Infected-Susceptible Model with Simple...
SEIS_odeSusceptible-Exposed-Infected-Susceptible Model
SHLIR_demographics_odeSusceptible-High-risk-latent-Low-risk-latent-Infected-Recovered...
SHLIR_odeSusceptible-High-risk-latent-Low-risk-latent-Infected-Recovered...
SHLITR_demographics_odeSusceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered...
SHLITR_odeSusceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered...
SHLITR_risk_demographics_odeSusceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered...
SHLITR_risk_odeSusceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered...
SI_demographics_odeSusceptible-Infected Model with Simple Demographics
simulate_modelA Function to Simulate a Model from a Generic Simulation...
SI_odeSusceptible-Infected Model
SIR_demographics_odeSusceptible-Infected-Recovered Model with Simple Demographics
SIR_odeSusceptible-Infected-Recovered Model
SIRS_demographics_odeSusceptible-Infected-Recovered-Susceptible Model with Simple...
SIRS_odeSusceptible-Infected-Recovered-Susceptible Model
SIRS_vaccination_demographics_odeSusceptible-Infected-Recovered-Susceptible Model with Simple...
SIRS_vaccination_odeSusceptible-Infected-Recovered-Susceptible Model with...
SIR_vaccination_demographics_odeSusceptible-Infected-Recovered Model with Simple Demographics...
SIR_vaccination_odeSusceptible-Infected-Recovered Model with Vaccination
SIS_demographics_odeSusceptible-Infected-Susceptible Model with Simple...
SIS_odeSusceptible-Infected-Susceptible Model
solve_odeA Simple Wrapper for lsoda
summarise_modelSummarise a Model Simulation
summarise_strat_varSum a Stratified Variable
summarise_var_by_stratSum a Stratified Variable by Stratification Level
idmodelr documentation built on July 1, 2020, 7:40 p.m.