fun_clu: main function for functional clustering

In idopNetwork: A Network Tool to Dissect Spatial Community Ecology

main function for functional clustering

Description

main function for functional clustering

Usage

fun_clu(
  data,
  k,
  Time = NULL,
  trans = log10,
  inv.cov = NULL,
  initial.pars = NULL,
  iter.max = 100,
  parscale = 0.1
)

Arguments

data	matrix or data for cluster
k	vector for the cluster number
Time	vector for the time point
trans	indicate log/log2/log10 transform dataset
inv.cov	matrix for directly solve cov matrix, default not given(currently not available)
initial.pars	vector for manual give initial parameters, default not given
iter.max	scales control iteration for EM algorithm
parscale	scales control parameters scales for cov pars

Value

the initial parameters for functional clustering

idopNetwork documentation built on April 18, 2023, 9:09 a.m.