mustard_microbe: mustard microbe OTU data
In idopNetwork: A Network Tool to Dissect Spatial Community Ecology
mustard_microbe R Documentation
mustard microbe OTU data
Description
Wagner, M. R. et al. Host genotype and age shape the leaf and root microbiomes of a wild perennial plant.
Nat. Commun. 7:12151 doi: 10.1038/ncomms12151 (2016)
This dataset is a subset of otuTable97, we select location = JAM, keep samples with both root
and leaf data, and then run data_cleaning first (set x = 50) to reduce size of this data.
Moreover, sample 8_1382 is removed for the outlier reason.
Usage
data(mustard_microbe)
Format
A data frame with 1557 rows and 176 column, contain first column as OTU ID:
idopNetwork documentation built on April 18, 2023, 9:09 a.m.
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| mustard_microbe | R Documentation |
mustard microbe OTU data
Description
Wagner, M. R. et al. Host genotype and age shape the leaf and root microbiomes of a wild perennial plant. Nat. Commun. 7:12151 doi: 10.1038/ncomms12151 (2016) This dataset is a subset of otuTable97, we select location = JAM, keep samples with both root and leaf data, and then run data_cleaning first (set x = 50) to reduce size of this data. Moreover, sample 8_1382 is removed for the outlier reason.
Usage
data(mustard_microbe)
Format
A data frame with 1557 rows and 176 column, contain first column as OTU ID:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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