percentilenormalize: given a matrix of intensity counts, perform min/max norm.
In imcExperiment: Mass Cytometry S4 Class Structure Pipeline for Images

given a matrix of intensity counts, perform min/max norm.

1	percentilenormalize(data = NULL, percentile = NULL)

`data`	matrix of numeric data only
`percentile`	numeric value 0.99 default.

normalized data, each column on [0,1] scale.

 data(data)
 dim(data)
 expr<-data[,3:36]
 normExp<-percentilenormalize(data=expr,percentile=0.99)
 normExp<-as.matrix(normExp)

imcExperiment documentation built on Aug. 19, 2021, 5:07 p.m.

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