inDAGO: A GUI for Dual and Bulk RNA-Sequencing Analysis

A 'shiny' app that supports both dual and bulk RNA-seq, with the dual RNA-seq functionality offering the flexibility to perform either a sequential approach (where reads are mapped separately to each genome) or a combined approach (where reads are aligned to a single merged genome). The user-friendly interface automates the analysis process, providing step-by-step guidance, making it easy for users to navigate between different analysis steps, and download intermediate results and publication-ready plots.

Getting started

Package details

AuthorCarmine Fruggiero [aut, cre], Gaetano Aufiero [aut]
MaintainerCarmine Fruggiero <fruggierocarmine3@gmail.com>
LicenseGPL (>= 3)
Version1.0.0
URL https://github.com/inDAGOverse/inDAGO
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("inDAGO")

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inDAGO documentation built on Aug. 8, 2025, 7:47 p.m.