IndexingComb: Combined indexing
In inDAGO: A GUI for Dual and Bulk RNA-Sequencing Analysis

IndexingComb

R Documentation

Combined indexing

Description

Combined indexing

Usage

IndexingComb(
  basename,
  reference,
  gappedIndex,
  indexSplit,
  memory,
  TH_subread,
  gen1,
  gen2,
  outfolder,
  tempfolder = file.path(fs::path_temp(), "TempDirSum_3738"),
  tag1,
  tag2
)

Arguments

`basename`	output basename
`reference`	reference genome
`gappedIndex`	gapped structure
`indexSplit`	split structure
`memory`	handling memory
`TH_subread`	threshold memory usage
`gen1`	first reference genome
`gen2`	second reference genome
`outfolder`	output folder
`tempfolder`	temporary folder
`tag1`	first genome label
`tag2`	second genome label