Description Usage Arguments Value Author(s) See Also Examples

This function can be used to find the peak of an epidemic curve stored as an
`incidence`

object.

1 |

`x` |
An |

`pool` |
If |

The date of the (first) highest incidence in the data.

Thibaut Jombart [email protected], Zhian N. Kamvar [email protected]

`estimate_peak()`

for bootstrap estimates of the peak time

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 | ```
if (require(outbreaks) && require(ggplot2)) { withAutoprint({
i <- incidence(fluH7N9_china_2013$date_of_onset)
i
plot(i)
## one simple bootstrap
x <- bootstrap(i)
x
plot(x)
## find 95% CI for peak time using bootstrap
find_peak(i)
## show confidence interval
plot(i) + geom_vline(xintercept = find_peak(i), col = "red", lty = 2)
})}
``` |

incidence documentation built on Aug. 25, 2018, 1:03 a.m.

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