auc.calculate: AUC value calculate

In inferCSN: Inferring Cell-Specific Gene Regulatory Network

AUC value calculate

Description

AUC value calculate

Usage

auc.calculate(
  weightDT,
  groundTruth,
  plot = FALSE,
  lineColor = "#1563cc",
  lineWidth = 1
)

Arguments

weightDT	The weight data table of network
groundTruth	Ground truth for calculate AUC
plot	If true, draw and print figure of AUC
lineColor	The color of line in the figure
lineWidth	The width of line in the figure

Value

AUC values and figure

Examples

library(inferCSN)
data("exampleMatrix")
data("exampleGroundTruth")
weightDT <- inferCSN(exampleMatrix)
auc <- auc.calculate(weightDT, exampleGroundTruth, plot = TRUE)
head(auc)

inferCSN documentation built on Nov. 2, 2023, 6:27 p.m.