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Integrative analysis of gene expression (RNA-Seq data), and histone modification data for user-defined sets of histone marks (ChIP-Seq data) to discover consistent changes in genes between biological conditions. Additionally, Pareto optimization is used to prioritize genes based on the level of consistent changes in both RNA-Seq and ChIP-Seq data. Method is described in Cao, Y. et al. (2020) <doi:10.1186/s12864-020-07205-6>.
Package details |
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Author | Yingying Cao [aut, cre] |
Maintainer | Yingying Cao <yingying.cao@uni-due.de> |
License | GPL (>= 2) |
Version | 0.1.2 |
Package repository | View on CRAN |
Installation |
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