Man pages for intePareto
Integrative Analysis of RNA-Seq and ChIP-Seq Data
| bam2counts | Compute the number of reads fall into specific genomic region |
| bam2rpm | Compute the normalized number of reads (rpm) fall into... |
| counts2lFC | Calculate log2FoldChange |
| df_final | an example of the result of doIntegration |
| doIntegration | Do integrative analysis |
| doMatch | Match the RNA-Seq and ChIP-Seq data on the gene level |
| doPareto | Prioritization of genes based on Z scores |
| promoter | an example of promoter region |
| res | an example of the result of doMatch |
| test_chip_meta | meta data of preprocessed ChIP-Seq data |
| test_rna_meta | meta data of preprocessed RNA-Seq data |
