plot_dyn_2D: plot sweep.dyn_2D outputs
In isobxr: Stable Isotope Box Modelling in R

plot_dyn_2D

R Documentation

plot sweep.dyn_2D outputs

Description

A function to plot delta vs time from the sweep.dyn_2D runs

Usage

plot_dyn_2D(
  workdir,
  sweep_dir_name,
  time_unit = NULL,
  time_range = NULL,
  hidden_boxes = NULL,
  return_as_print = TRUE,
  free_y_scale = TRUE,
  swap_sweep_params = FALSE,
  show.delta_drift = FALSE,
  time_as_log10 = TRUE
)

Arguments

`workdir`	Working directory of *isobxr excel master file* and where output files will be stored if exported by user. (character string)
`sweep_dir_name`	Full name of sweep.dyn_2D SERIES directory (character string)
`time_unit`	Time unit to use on plot if different from native time unit. Character string, to be selected among the following: micros, ms, s, min, h, d, wk, mo, yr, kyr, Myr, Gyr Default is NULL.
`time_range`	Time range to zoom on as vector of two values, such as: c(0,100) Values in displayed time units. Default is NULL.
`hidden_boxes`	List of boxes to hide from plots, as a vector of character strings. For instance c("SOURCE", "SINK"). Default is NULL.
`return_as_print`	If TRUE, prints delta and size vs. time plots in a single page figure on R. If FALSE, returns separately delta and size vs. time plots as list of editable R objects. Default is TRUE.
`free_y_scale`	If TRUE, frees Y axis scale. Default is TRUE.
`swap_sweep_params`	If TRUE, swaps the sweep parameter 1 and 2 representations from color to facet scales. Default is FALSE.
`show.delta_drift`	If TRUE, displays drift of delta values from t0.
`time_as_log10`	If TRUE, uses logarithmic time scale in plot. Default is TRUE.