read.isobxr_master: Read and inspect isobxr master files

In isobxr: Stable Isotope Box Modelling in R

Read and inspect isobxr master files

Description

A function to read and inspect the isobxr master files and obtain a master formatted list.

Usage

read.isobxr_master(
  workdir,
  isobxr_master_file = "0_ISOBXR_MASTER",
  inspect = TRUE,
  export_rds = FALSE
)

Arguments

workdir	Working directory of isobxr excel master file and where output files will be stored if exported by user. (character string)
isobxr_master_file	Name of isobxr excel master file. (without file "xlsx" extension). Default is "0_ISOBXR_MASTER".
inspect	If TRUE, checks all inputs from isobxr master file for format and structure errors. Default is TRUE.
export_rds	If TRUE, exports rds version of isobxr master file to working directory. Default is FALSE.

Value

A formatted list of data frames containing constants, box, fluxes and fractionation coefficients descriptions.

Examples

read.isobxr_master(workdir = "/Users/username/Documents/1_ABC_tutorial",
                   isobxr_master_file = "0_ISOBXR_MASTER",
                   export_rds = FALSE,
                   inspect = TRUE)

isobxr documentation built on Aug. 23, 2023, 5:06 p.m.