kernscr: Kernel Machine Score Test for Semi-Competing Risks

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Kernel Machine Score Test for Pathway Analysis in the Presence of Semi-Competing Risks.

Author
Matey Neykov [aut], Boris P. Hejblum [aut, cre], Jennifer A. Sinnot [aut]
Date of publication
2016-06-29 02:29:01
Maintainer
Boris P. Hejblum <bhejblum@hsph.harvard.edu>
License
GPL-2 | file LICENSE
Version
1.0.3

View on CRAN

Man pages

Ahat
Ahat computation
cancer_pathways
70 pathways from MSigDB c2CP
compute_all_tests
Testing pathway risk association
dM
dM
findRhoInterval
Find an interval contraining the rho parameter for a non...
kernelEval
Evaluation of kernels
kernscr-package
kernscr: a package to perform Kernel Machine Score Test for...
lambda
Lambda and its perturbation
M_vec
M vector and its perturbation
PI_0
PI_0
PI_1
PI_2
PI_2
PI_2
plot_kernscr
Plotting functions used in the manuscript
sim_SCR_data
Data Simulation Function
VTM
VTM

Files in this package

kernscr
kernscr/inst
kernscr/inst/CITATION
kernscr/NAMESPACE
kernscr/NEWS
kernscr/data
kernscr/data/cancer_pathways.RData
kernscr/R
kernscr/R/kernscr-package.R
kernscr/R/kerneval.R
kernscr/R/vijver.R
kernscr/R/Ahat.R
kernscr/R/lambda.R
kernscr/R/PI_1.R
kernscr/R/sim_SCR_data.R
kernscr/R/PI_2.R
kernscr/R/plot_kernscr.R
kernscr/R/VTM.R
kernscr/R/PI_0.R
kernscr/R/compute_all_tests.R
kernscr/R/M_vec.R
kernscr/R/findRhoInterval.R
kernscr/R/dM.R
kernscr/MD5
kernscr/README
kernscr/DESCRIPTION
kernscr/man
kernscr/man/PI_0.Rd
kernscr/man/kernelEval.Rd
kernscr/man/compute_all_tests.Rd
kernscr/man/PI_2.Rd
kernscr/man/sim_SCR_data.Rd
kernscr/man/PI_1.Rd
kernscr/man/cancer_pathways.Rd
kernscr/man/lambda.Rd
kernscr/man/plot_kernscr.Rd
kernscr/man/M_vec.Rd
kernscr/man/VTM.Rd
kernscr/man/kernscr-package.Rd
kernscr/man/Ahat.Rd
kernscr/man/findRhoInterval.Rd
kernscr/man/dM.Rd
kernscr/LICENSE