Special Cases: Linear and Logistic Regression"

In kindling: Higher-Level Interface of 'torch' Package to Auto-Train Neural Networks

knitr::opts_chunk$set(
    eval = identical(Sys.getenv("NOT_CRAN"), "true"), 
    fig.width = 7,
    fig.height = 5,
    warning = FALSE,
    message = FALSE
)

# Sys.setenv("_R_USE_PIPEBIND_" = TRUE)

What's so special about {kindling}

This package is planned to make it compatible for any machine learning task, even time series and image classification cam be supported. Yes, you can do both linear regression and logistic regression with extra steps: heavily customized optimizer and loss functions. The train_nn() function (available on >v0.3.x) supports this { optimizer $\leftrightarrow$ optimizer_args } and { loss }. For both cases, the key is to remove all hidden layers and rely entirely on the output layer and the appropriate loss function to recover the classical model's behavior.

Setup

box::use(
    kindling[train_nn, act_funs, args],
    recipes[
        recipe, step_dummy, step_normalize,
        all_nominal_predictors, all_numeric_predictors
    ],
    rsample[initial_split, training, testing],
    yardstick[metric_set, rmse, rsq, accuracy, mn_log_loss],
    dplyr[mutate, select],
    tibble[tibble]
)

Linear Regression as a Special Case

A standard linear regression model predicts a continuous outcome as a weighted sum of inputs — no nonlinearity, no hidden layers. A neural network recovers this exactly when:

• There are no hidden layers (hidden_neurons = integer(0) or simply omit it),
• The output activation is the identity (i.e., no activation), and
• The common loss function is MSE, but we can choose different loss function: (loss = "mse").

Under these conditions, gradient descent minimizes the same objective as ordinary least squares, and the learned weights converge to the OLS solution given sufficient epochs and a small learning rate.

Data

We use mtcars to predict fuel efficiency (mpg) from the other variables.

set.seed(42)
split = initial_split(mtcars, prop = 0.8)
train = training(split)
test = testing(split)

rec = recipe(mpg ~ ., data = train) |>
    step_normalize(all_numeric_predictors())

Fitting the model

To create no hidden units, the hidden_neuron parameter from train_nn() considers the following to achieve:

1. NULL
2. Empty c()
3. No arguments at all

In this example, the empty vector c() is used and will collapse the network to a single linear layer from inputs to output. The optimizer = "rmsprop" with a small learn_rate mirrors classical gradient descent for OLS.

lm_nn = train_nn(
    mpg ~ .,
    data = train,
    hidden_neurons = c(),
    loss = torch::nnf_l1_loss,
    optimizer = "rmsprop", 
    learn_rate = 0.01,
    epochs = 200,
    verbose = FALSE
)

lm_nn

Evaluation

preds = predict(lm_nn, newdata = test)

tibble(
    truth = test$mpg,
    estimate = preds
) |>
    metric_set(rmse, rsq)(truth = truth, estimate = estimate)

Comparison with lm()

lm_fit = lm(mpg ~ ., data = train)

tibble(
    truth = test$mpg,
    estimate = predict(lm_fit, newdata = test)
) |>
    metric_set(rmse, rsq)(truth = truth, estimate = estimate)

The two models should produce very similar RMSE and $R^2$ values. Any small gap reflects that gradient descent is an iterative approximation, while lm() solves for the exact OLS coefficients directly. Increasing epochs or switching to optimizer = "lbfgs" (if supported) will close the gap further.

Logistic Regression as a Special Case

Logistic regression models a binary or multiclass outcome by passing a linear combination of inputs through a sigmoid or softmax activation. A neural network with:

• No hidden layers,
• A sigmoid output for binary classification (or softmax for multiclass), and
• Cross-entropy (loss = "cross_entropy") for the loss function

is mathematically equivalent to logistic regression.

Binary Logistic Regression

We use the Sonar dataset from {mlbench} to distinguish rocks from mines (binary outcome).

data("Sonar", package = "mlbench")

sonar = Sonar
set.seed(42)
split_s = initial_split(sonar, prop = 0.8, strata = Class)
train_s = training(split_s)
test_s = testing(split_s)

rec_s = recipe(Class ~ ., data = train_s) |>
    step_normalize(all_numeric_predictors())

logit_nn = train_nn(
    Class ~ .,
    data = train_s,
    hidden_neurons = c(),
    loss = "cross_entropy",
    optimizer = "adam",
    learn_rate = 0.01,
    epochs = 200,
    verbose = FALSE
)

logit_nn

preds_s = predict(logit_nn, newdata = test_s, type = "response")

tibble(
    truth = test_s$Class,
    estimate = preds_s
) |>
    accuracy(truth = truth, estimate = estimate)

Comparison with glm() / nnet::multinom()

box::use(nnet[multinom])

glm_fit = glm(Class ~ ., data = train_s, family = binomial())

tibble(
    truth = test_s$Class,
    estimate = {
        as.factor({
            preds = predict(glm_fit, newdata = test_s, type = "response")
            ifelse(preds < 0.5, "M", "R")
        })
    }
) |>
    accuracy(truth = truth, estimate = estimate)

Again, accuracy should be comparable between the two approaches. The neural network version converges iteratively, so the match is not guaranteed to be exact, but both are optimizing the same cross-entropy objective over a linear model.

kindling documentation built on March 3, 2026, 9:07 a.m.