landpred: Landmark Prediction of a Survival Outcome
Version 1.0

This package includes functions for landmark prediction of a survival outcome incorporating covariate and short-term event information. For more information about landmark prediction please see: Parast, Layla, Su-Chun Cheng, and Tianxi Cai. Incorporating short-term outcome information to predict long-term survival with discrete markers. Biometrical Journal 53.2 (2011): 294-307.

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AuthorLayla Parast
Date of publication2014-10-18 06:36:04
MaintainerLayla Parast <parast@rand.org>
LicenseGPL
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("landpred")

Man pages

AUC.landmark: Estimates the area under the ROC curve (AUC).
BS.landmark: Estimates the Brier score.
cumsum2: Helper function for AUC.landmark
data_example_landpred: Hypothetical data to be used in examples.
Ghat.FUN: Calculates the Kaplan Meier survival probability for...
helper.si: Helper function for AUC.landmark
Kern.FUN: Calculates kernel matrix
landpred-package: Landmark Prediction of a Survival Outcome
mse.BW: Helper function for optimize.mse.BW.
optimize.mse.BW: Calculates initial optimal bandwidth.
Prob2: Estimates P(TL <t0+tau | TL > t0, Z, TS>t0).
Prob2.k.t: Estimates P(TL <t0+tau | TL > t0, Z, TS==ts).
prob2.single: Estimates P(TL <t0+tau | TL > t0, Z, TS==ts) for a single t.
Prob.Covariate: Estimates P(TL <t0+tau | TL > t0, Z), i.e. given discrete...
Prob.Covariate.ShortEvent: Estimates P(TL <t0+tau | TL > t0, Z, min(TS, t0), I(TS<=t0)),...
Prob.Null: Estimates P(TL <t0+tau | TL > t0).
VTM: Helper function, repeats a row.
Wi.FUN: Computes the inverse probability of censoring weights for a...

Functions

AUC.landmark Man page Source code
BS.landmark Man page Source code
Ghat.FUN Man page Source code
Kern.FUN Man page Source code
Prob.Covariate Man page Source code
Prob.Covariate.ShortEvent Man page Source code
Prob.Null Man page Source code
Prob2 Man page Source code
Prob2.k.t Man page Source code
VTM Man page Source code
Wi.FUN Man page Source code
cumsum2 Man page Source code
data_example_landpred Man page
helper.si Man page Source code
landpred Man page
landpred-package Man page
mse.BW Man page Source code
optimize.mse.BW Man page Source code
prob2.single Man page Source code

Files

NAMESPACE
data
data/data_example_landpred.RData
R
R/landpred.R
MD5
DESCRIPTION
man
man/prob2.single.Rd
man/Prob.Null.Rd
man/Prob2.Rd
man/Ghat.FUN.Rd
man/optimize.mse.BW.Rd
man/cumsum2.Rd
man/landpred-package.Rd
man/BS.landmark.Rd
man/Prob.Covariate.ShortEvent.Rd
man/Prob.Covariate.Rd
man/VTM.Rd
man/helper.si.Rd
man/mse.BW.Rd
man/Wi.FUN.Rd
man/Kern.FUN.Rd
man/Prob2.k.t.Rd
man/AUC.landmark.Rd
man/data_example_landpred.Rd
landpred documentation built on May 29, 2017, 9:16 a.m.