ldstatsHD: Linear Dependence Statistics for High-Dimensional Data

Statistical methods related to the estimation and testing of multiple correlation, partial correlation and regression coefficient matrices when data is high-dimensional.

AuthorAdria Caballe <a.caballe@sms.ed.ac.uk>
Date of publication2016-08-18 15:57:55
MaintainerAdria Caballe <a.caballe@sms.ed.ac.uk>
LicenseGPL-3
Version1.0.0

View on CRAN

Man pages

aagnesLambdaSelection: Augmented-MSE regularization parameter selection

agnesAC: AGNES coefficient

agnesLambdaSelection: AGNES regularization parameter selection

aicBicLambdaSelection: AIC/BIC regularization parameter selection

cor2mean: Average square correlation by rows

cor2meanAdj: adjusted average square correlation by rows

eqCorrMatTest: equality of two correlation matrices test

eqCorTestByRows: Correlation matrices test by rows

EstradaIndex: Estrada Index of a graph structure

graphCorr: One minus graph correlation matrix

graphDist: Inverse of the geodesic distance matrix

harmonicMean: Harmonic mean of network distances

lambdaSelection: Regularization parameter selection based on network...

ldstatsHD-internal: Internal functions

ldstatsHD-package: Linear Dependence Statistics for High-Dimensional data

pcLambdaSelection: Path Connectivity regularization parameter selection

pcorSimulator: Partial Correlation Matrix simulator

pcorSimulatorJoint: joint partial correlation matrices simulator

plotequalityCorrelationsByRows: plot for equality of two correlation matrices by rows test

plotPcorSimulator: Partial correlation matrix simulator plot

plotPcorSimulatorJoint: Joint partial correlation matrix simulator plot

plotwfgl: Joint partial correlation matrix estimator plot

plotwfrl: Joint regression coefficient matrix estimator plot

vulnLambdaSelection: Vulnerability regularization parameter selection

wfgl: weighted fused graphical lasso

wfrl: joint estimation of multiple regression coefficient matrices

Files in this package

ldstatsHD
ldstatsHD/NAMESPACE
ldstatsHD/R
ldstatsHD/R/controlswfgl.r
ldstatsHD/R/summarylambdaSelection.r
ldstatsHD/R/wfgl.r
ldstatsHD/R/plotEqCorrMatTest.r
ldstatsHD/R/rowScale.r
ldstatsHD/R/ztransfCorrDiff.r
ldstatsHD/R/printEqCorrTestByRows.r
ldstatsHD/R/equalCorrelationsTestPerm.r
ldstatsHD/R/degrees.r
ldstatsHD/R/cor2mean.r
ldstatsHD/R/equalCorrelationsTestSS.r
ldstatsHD/R/controlsCorrelationsTestByRows.r
ldstatsHD/R/plotwfrl.r
ldstatsHD/R/harmMean.r
ldstatsHD/R/agnesAC.r
ldstatsHD/R/identCorrelationMatricesTest.r
ldstatsHD/R/pcorSimulatorJoint.r
ldstatsHD/R/wfrl.r
ldstatsHD/R/plotlambdaSelection.r
ldstatsHD/R/ztransf.r
ldstatsHD/R/summarywfgl.r
ldstatsHD/R/controlsPcorSimulatorJoint.r
ldstatsHD/R/lambdaSelection.r
ldstatsHD/R/equalityCorrelationsTestByRows.r
ldstatsHD/R/flsaFast.r
ldstatsHD/R/estradaIndex.r
ldstatsHD/R/equalCorrelationsTestMax.r
ldstatsHD/R/controlswfrl.r
ldstatsHD/R/correlationTestByRows.r
ldstatsHD/R/equalCorrelationMatricesTestFunc.r
ldstatsHD/R/summarywfrl.r
ldstatsHD/R/covCrosCor.r
ldstatsHD/R/plotwfgl.r
ldstatsHD/R/plotPcorSim.r
ldstatsHD/R/findTriangles.r
ldstatsHD/R/connBtwClusters.r
ldstatsHD/R/printEqCorrMatTest.r
ldstatsHD/R/aagnesLambdaSelection.r
ldstatsHD/R/plotEqCorrTestByRows.r
ldstatsHD/R/pvaluesTriangleWeakestEdge.r
ldstatsHD/R/printlambdaSelection.r
ldstatsHD/R/graphDist.r
ldstatsHD/R/pcor2jointGraph.r
ldstatsHD/R/graphCorr.r
ldstatsHD/R/agnesLambdaSelection.r
ldstatsHD/R/pcorSimulator.R
ldstatsHD/R/vulLambdaSelection.r
ldstatsHD/R/printPcorSim.r
ldstatsHD/R/printPcorSimJoint.r
ldstatsHD/R/printwfrl.r
ldstatsHD/R/softA.R
ldstatsHD/R/pcLambdaSelection.r
ldstatsHD/R/meanCors.r
ldstatsHD/R/lowerTriInd.r
ldstatsHD/R/summaryEqCorrMatTest.r
ldstatsHD/R/summaryPcorSim.r
ldstatsHD/R/equalCorrelationMatricesTest.r
ldstatsHD/R/graphStructure.R
ldstatsHD/R/summaryEqCorrTestByRows.r
ldstatsHD/R/aicLambdaSelection.r
ldstatsHD/R/cor2meanAdj.r
ldstatsHD/R/equalityCorrelationsTestByRowsFunc.r
ldstatsHD/R/controlsPcorSimulator.r
ldstatsHD/R/pcorSimulatorJointPaired.r
ldstatsHD/R/lowerTri.r
ldstatsHD/R/lowerTriSub.r
ldstatsHD/R/printwfgl.r
ldstatsHD/R/summaryPcorSimJoint.r
ldstatsHD/R/plotPcorSimJoint.r
ldstatsHD/R/equalCorrelationsTestExc.r
ldstatsHD/MD5
ldstatsHD/DESCRIPTION
ldstatsHD/man
ldstatsHD/man/plotwfgl.Rd ldstatsHD/man/EstradaIndex.Rd ldstatsHD/man/agnesLambdaSelection.Rd ldstatsHD/man/ldstatsHD-internal.Rd ldstatsHD/man/plotPcorSimulatorJoint.Rd ldstatsHD/man/harmonicMean.Rd ldstatsHD/man/cor2meanAdj.Rd ldstatsHD/man/aicBicLambdaSelection.Rd ldstatsHD/man/eqCorrMatTest.Rd ldstatsHD/man/graphDist.Rd ldstatsHD/man/pcorSimulatorJoint.Rd ldstatsHD/man/graphCorr.Rd ldstatsHD/man/pcorSimulator.Rd ldstatsHD/man/vulnLambdaSelection.Rd ldstatsHD/man/wfgl.Rd ldstatsHD/man/pcLambdaSelection.Rd ldstatsHD/man/lambdaSelection.Rd ldstatsHD/man/aagnesLambdaSelection.Rd ldstatsHD/man/plotequalityCorrelationsByRows.Rd ldstatsHD/man/wfrl.Rd ldstatsHD/man/eqCorTestByRows.Rd ldstatsHD/man/plotPcorSimulator.Rd ldstatsHD/man/ldstatsHD-package.Rd ldstatsHD/man/plotwfrl.Rd ldstatsHD/man/cor2mean.Rd ldstatsHD/man/agnesAC.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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