| AlternateSVD | Alternating singular value decomposition |
| FindAUC | Compute the area under the ROC curve (AUC) |
| FindFpr | Compute the false positive rate at given sizes of retrieved... |
| FindPrec | compute the precision at given sizes of retrieved genes |
| FindRec | compute the recall at given sizes of retrieved genes |
| FindTpr | compute the true positive rate at given sizes of retrieved... |
| IPOD | Iterative penalized outlier detection algorithm |
| IPODFUN | compute the iterative penalized outlier detection given the... |
| leapp | latent effect adjustment after primary projection |
| leapp-package | latent effect adjustment after primary projection |
| Pvalue | Calculate statistics and p-values |
| ridge | Outlier detection with a ridge penalty |
| ROCplot | plot ROC curve |
| simdat | Simulated gene expression data affected by a group variable... |
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