lets.subsetPAM: Subset a PresenceAbsence object based on species names

In letsR: Data Handling and Analysis in Macroecology

Subset a PresenceAbsence object based on species names

Description

Subset a PresenceAbsence object based on species character vector provided by the user.

Usage

lets.subsetPAM(x, names, remove.cells = TRUE)

Arguments

x	A PresenceAbsence object.
names	Character vector with species names to subset the PresenceAbsence object.
remove.cells	Logical, if TRUE the final matrix will not contain cells in the grid with a value of zero (i.e. sites with no species present).

Value

The result is an object of class PresenceAbsence subseted.

Author(s)

Bruno Vilela

See Also

plot.PresenceAbsence

lets.presab.birds

Examples

## Not run: 
data(PAM)
# PAM before subset
plot(PAM, xlab = "Longitude", ylab = "Latitude",
     main = "Phyllomedusa species richness")

# Subset PAM to the first 20 species
PAMsub <- lets.subsetPAM(PAM, PAM[[3]][1:20])
plot(PAMsub, xlab = "Longitude", ylab = "Latitude",
     main = "Phyllomedusa species richness")

## End(Not run)

letsR documentation built on Nov. 23, 2023, 9:07 a.m.