AT.FLUKA.read.USRBIN.regs: AT.FLUKA.read.USRBIN.regs

In libamtrack: Computational Routines for Proton and Ion Radiotherapy

Description

Reads USRBIN output for a series of regions, also for multiple output files from cluster runs. As USRBIN (regions, option 12.0) scores energy deposited per primary weight (GeV), both the region volume(s) and density(ies) have to be given for dose computation.

Usage

AT.FLUKA.read.USRBIN.regs(exp.name, number.of.runs, unit, data.source =
 'local', vol.cm3 = NULL, density.g.cm3 = NULL)

Arguments

exp.name	Experiment name, i.e. name of input file (without '.inp' extension)
number.of.runs	Number of output files from parallel (cluster) runs.
unit	FLUKA output unit number
data.source	'local' if output files are from a local machine, 'condor' if from condor cluster, 'condor_cleaned' if from condor cluster with clean option (-c) in rcfluka.py
vol.cm3	Volume of regions, either single value (will be applied to all regions) or vector of length matching the number of regions (individual volume for each region).
density.g.cm3	Physical density of regions, either single value (will be applied to all regions) or vector of length matching the number of regions (individual density for each region).

Value

Data frame with deposited energy, deposited dose (and in case of multiple runs estimate of their standard deviation) for each region.

Examples

# None yet, requires FLUKA output file

libamtrack documentation built on May 1, 2019, 6:47 p.m.