In liftr: Containerize R Markdown Documents for Continuous Reproducibility

FROM r liftr_from

MAINTAINER r liftr_maintainer <r liftr_email>

System dependencies for required R packages

RUN rm -f /var/lib/dpkg/available \ && rm -rf /var/cache/apt/* \ && apt-get update -qq \ && apt-get install -y --no-install-recommends \ ca-certificates \ libssl-dev \ libcurl4-openssl-dev \ libxml2-dev \ git

r liftr_sysdeps

r liftr_texlive

r liftr_pandoc

RUN Rscript -e "install.packages(c(r liftr_factory), repos = 'https://cran.rstudio.com')"

r liftr_cran

r liftr_bioc

r liftr_remotes

r liftr_include

RUN mkdir /liftrroot/ WORKDIR /liftrroot/

liftr documentation built on June 19, 2019, 9:03 a.m.