lineup: Lining Up Two Sets of Measurements

Tools for detecting and correcting sample mix-ups between two sets of measurements, such as between gene expression data on two tissues.

AuthorKarl W Broman <kbroman@biostat.wisc.edu>
Date of publication2015-07-29 00:11:39
MaintainerKarl W Broman <kbroman@biostat.wisc.edu>
LicenseGPL-3
Version0.37-6
https://github.com/kbroman/lineup

View on CRAN

Files in this package

lineup
lineup/inst
lineup/inst/TODO.txt
lineup/inst/LICENSE.txt
lineup/inst/doc
lineup/inst/doc/lineup.R
lineup/inst/doc/lineup.Rmd
lineup/inst/doc/lineup.html
lineup/tests
lineup/tests/testthat.R
lineup/tests/testthat
lineup/tests/testthat/test-combinedist.R
lineup/tests/testthat/test-corbetw2mat.R
lineup/src
lineup/src/util.c
lineup/src/rmsd.c
lineup/src/propmismatch.c
lineup/src/fscale.h
lineup/src/propmismatch.h
lineup/src/util.h
lineup/src/rmsd.h
lineup/src/corbetw2mat.c
lineup/src/corbetw2mat.h
lineup/src/fscale.c
lineup/NAMESPACE
lineup/NEWS
lineup/data
lineup/data/pmap.rda
lineup/data/expr1.rda
lineup/data/genepos.rda
lineup/data/datalist
lineup/data/f2cross.rda
lineup/data/expr2.rda
lineup/R
lineup/R/disteg.R lineup/R/f2cross-data.R lineup/R/genepos-data.R lineup/R/omitdiag.R lineup/R/combinedist.R lineup/R/corbetw2mat.R lineup/R/plot.lineupdist.R lineup/R/pmap-data.R lineup/R/subset.lineupdist.R lineup/R/find.gene.pseudomarker.R lineup/R/findCommonID.R lineup/R/plotEGclass.R lineup/R/util.R lineup/R/expr1-data.R lineup/R/plot2dist.R lineup/R/fscale.R lineup/R/distee.R lineup/R/summary.lineupdist.R lineup/R/pulldiag.R lineup/R/calc.locallod.R
lineup/vignettes
lineup/vignettes/lineup.Rmd
lineup/MD5
lineup/build
lineup/build/vignette.rds
lineup/DESCRIPTION
lineup/ChangeLog
lineup/man
lineup/man/calc.locallod.Rd lineup/man/lineupversion.Rd lineup/man/plot2dist.Rd lineup/man/plot.lineupdist.Rd lineup/man/pmap.Rd lineup/man/omitdiag.Rd lineup/man/expr-data.Rd lineup/man/corbetw2mat.Rd lineup/man/find.gene.pseudomarker.Rd lineup/man/summary.lineupdist.Rd lineup/man/subset.lineupdist.Rd lineup/man/distee.Rd lineup/man/f2cross.Rd lineup/man/pulldiag.Rd lineup/man/plotEGclass.Rd lineup/man/combinedist.Rd lineup/man/findCommonID.Rd lineup/man/disteg.Rd lineup/man/fscale.Rd lineup/man/genepos.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.