Man pages for loop
loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology
| convertion | this function convert graph matrix form into graph edge form |
| decomp | decompose the weighted graph into directional single... |
| find.ranks | make food trophic ranks for all the species in the matrix for... |
| fplot | Another way to plot network structure based on similar vertex... |
| fplot.foodweb | a special group graph plot function for food web-style... |
| gplot | make a plot for directional graph from edge matrix graph form |
| gplot1 | plot directed graphs directly from square graph matrix |
| groupplot | A group way to plot network structure based on similar vertex... |
| groupplot.foodweb | a special group graph plot function for food web-style... |
| largest.weight | find out the food chain with largest weights among all food... |
| lclw | find the largest weight food chain among the candidate... |
| longest.chain | find out the food chain with longest length among all food... |
| loop.forward | forward method to decompose the weighted graph into single... |
| loop-package | an R package for analyzing and plotting directed networks |
| loop.random | a random method to decompose the weighted graph into single... |
| mst.primm | Primm's algorithm to search minimum spanning tree |
| nmds.ordination | perform non-dimensional scaling of the nodes by employing the... |
| node.similarity | calculate pair similarity of nodes based on the nodes'... |
| pathways | enumerate all food chains that are linked to a given... |
| rank.nodes | rank nodes based on the inward links/outward links/both links |
| shortest.chain | find out the food chain with shortest length among all food... |
| smallest.weight | find out the food chain with shortest weight among all food... |
| uniquepaths | enumerate all unique food chains that are linked to a given... |
