join.ensembl.and.ccds: Join genes from ensembl and ccds in a single table

In loose.rock: Tools for Survival Analysis and Data Science

Description

[INTERNAL] Finds the ensembl ids of genes from ccds

Usage

join.ensembl.and.ccds(
  ensembl.genes,
  ccds.genes,
  mart,
  useCache = TRUE,
  verbose = FALSE
)

Arguments

ensembl.genes	protein coding genes from ensembl
ccds.genes	protein coding genes from ccds
mart	biomaRt dataset to use
useCache	should biomart use cache
verbose	show extra messages

Value

table with ensembl_gene_id and external_gene_name columns

loose.rock documentation built on April 30, 2021, 1:06 a.m.