lpbrim: LP-BRIM Bipartite Modularity

Optimization of bipartite modularity using LP-BRIM (Label propagation followed by Bipartite Recursively Induced Modularity).

Author
Timothee Poisot <tim@poisotlab.io>, Daniel B Stouffer <daniel.stouffer@canterbury.ac.nz>
Date of publication
2015-07-18 17:00:13
Maintainer
Timothee Poisot <tim@poisotlab.io>
License
BSD_2_clause + file LICENSE
Version
1.0.0
URLs

View on CRAN

Man pages

bBRIM
BRIM
bLP
Bipartite label propagation (LP)
findModules
Find modules
getmodules
Get modules
mostFrequent
Most frequent value
netToAdjacency
Edge list to adjacency matrix
plotMatrixModules
Plot the modules as a matrix
plotModules
Plot the modules as a network
Qbip
Barber's modularity
spread
Spread

Files in this package

lpbrim
lpbrim/NAMESPACE
lpbrim/R
lpbrim/R/findModules.r
lpbrim/R/getmodules.r
lpbrim/R/common.r
lpbrim/R/LPBRIM.r
lpbrim/R/plots.r
lpbrim/MD5
lpbrim/DESCRIPTION
lpbrim/man
lpbrim/man/getmodules.Rd
lpbrim/man/plotModules.Rd
lpbrim/man/bBRIM.Rd
lpbrim/man/bLP.Rd
lpbrim/man/netToAdjacency.Rd
lpbrim/man/Qbip.Rd
lpbrim/man/findModules.Rd
lpbrim/man/mostFrequent.Rd
lpbrim/man/plotMatrixModules.Rd
lpbrim/man/spread.Rd
lpbrim/LICENSE