findModules: Find modules

In lpbrim: LP-BRIM Bipartite Modularity

Description

This function takes a matrix, and performs a search for the best partition in modules.

Usage

findModules(M, iter = 50, sparse = TRUE, ...)

Arguments

M	An adjacency matrix
iter	Number of optimization runs to do
sparse	Whether the matrix should be made sparse
...	Other arguments

Examples

M <- matrix(rbinom(100, 1, 0.3), ncol=10)
M <- M[rowSums(M)>0, colSums(M)>0]
mod <- findModules(M, iter=2, sparse=FALSE)

Example output

lpbrim documentation built on May 1, 2019, 8:42 p.m.