Man pages for mads
Multi-Analysis Distance Sampling
| accumulate.results | Enters the prorated results into the bootstrap.results array |
| calculate.dht | Calculates the abundance for each species code including the... |
| check.convergence | Checks whether the model has converged |
| check.covar.uncertainty | Performs checks on the covariate.uncertainty dataframe |
| check.ddf.models | Checks the list of model names supplied by the user |
| check.fitted | Checks whether the model's fitted values make sense |
| check.species.code.definitions | Checks the list of species code definitions supplied by the... |
| check.species.presence | Checks the list of species presence definitions supplied by... |
| create.obs.table | Creates a subsetted observation table |
| create.param.arrays | Creates a list of arrays for storing the ddf results |
| create.result.arrays | Creates a list of arrays for storing the dht results |
| execute.multi.analysis | Performs Multiple Analyses on Distance Data |
| fit.ddf.models | Refits the detection functions to the resampled data |
| format.dht.results | Formats the estimated abundances of all species categories,... |
| get.datasets | Extracts the data and models from the ddf objects |
| mads.data | Example simulated data used to demonstrate the package... |
| mads-package | Multi-Analysis Distance Sampling (mads) |
| mae.warning | Warning function |
| model.description | Extracts the model description |
| process.bootstrap.results | Summarises the bootstrap results. |
| process.warnings | Summarises warnings |
| prorate.unidentified | Prorate the estimated abundances of the unidentified... |
| renumber.duplicates | Renumbers the object IDs for the duplicate observations... |
| resample.covariates | Parametrically resamples selected variables in the dataset. |
| resample.data | Resamples the data for the bootstrap |
| rtpois | Randomly generates values from a zero-truncated Poisson... |
| store.param.ests | Updates bootstrap.ddf.statistics |
| summary.ma | Summary of multi-analysis object |
| summary.ma.allspecies | Summary of multi-analysis object |
| summary.ma.allunid | Summary of multi-analysis object |
| summary.ma.analysis | Summary of multi-analysis object |
| summary.ma.species | Print a summary of an element of a multi-analysis result... |
| summary.ma.unid | Summary of multi-analysis object |
